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Tan0022316 (gene) of Snake gourd v1 genome

Gene IDTan0022316
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein Ycf2-like
Genome locationLG11:17150960..17153574
RNA-Seq ExpressionTan0022316
SyntenyTan0022316
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025875.1 uncharacterized protein E6C27_scaffold34G001540 [Cucumis melo var. makuwa]1.1e-0927.55Show/hide
Query:  DTPTASDGEQPARKKSKKDVVKKETPHKKIDSRK--------------GKMVSTKKPDDEQHDTKKIPSSQLILHLIQRQCKPKKSSKLNIKINGKILTF
        ++P  S        K K+  V+K+   K + SRK              GK+ + KK +  + D ++   + +     +R CKPK +S+L   I G++L F
Subjt:  DTPTASDGEQPARKKSKKDVVKKETPHKKIDSRK--------------GKMVSTKKPDDEQHDTKKIPSSQLILHLIQRQCKPKKSSKLNIKINGKILTF

Query:  EMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPYFQP--LLHDDMSLRRKGEPRTVVDDEQV
         +REF+LI GL C  IP I+ + ++GGG+ K  YF+  + +  + LN+ F +          ++ + YF    L+     L    +   +VDD++V
Subjt:  EMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPYFQP--LLHDDMSLRRKGEPRTVVDDEQV

KAA0035989.1 protein Ycf2-like [Cucumis melo var. makuwa]4.2e-0935.34Show/hide
Query:  CKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPYFQP--LLHDDMS
        CKPK +++L   I G++L F +REF LI GL C  IP I+   ++GGG+ K  YF     M R+ LNI F +          ++ + YF    L+     
Subjt:  CKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPYFQP--LLHDDMS

Query:  LRRKGEPRTVVDDEQV
        L  + +  T+VDD++V
Subjt:  LRRKGEPRTVVDDEQV

KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]3.3e-1442.57Show/hide
Query:  SSQLILHLIQRQCKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPY
        SSQL+LHLIQR CKPK +S+L   I G++L F +REF+LI GL C  IP I+ + + GGG+ K  YF+    + R+ LN+ F +          ++ + Y
Subjt:  SSQLILHLIQRQCKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPY

Query:  F
        F
Subjt:  F

KAA0051382.1 protein Ycf2-like [Cucumis melo var. makuwa]8.5e-1035.34Show/hide
Query:  CKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPYFQP--LLHDDMS
        CKPK +SKL   I G++L F +REF+LI GL C  IP I+ D ++GGG+ K  YF+    + R+ LN+ F +          ++ + YF    L+     
Subjt:  CKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPYFQP--LLHDDMS

Query:  LRRKGEPRTVVDDEQV
        L    +   +VDD++V
Subjt:  LRRKGEPRTVVDDEQV

TYK23840.1 protein Ycf2-like [Cucumis melo var. makuwa]8.5e-1035.34Show/hide
Query:  CKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPYFQP--LLHDDMS
        CKPK +SKL   I G++L F +REF+LI GL C  IP I+ D ++GGG+ K  YF+    + R+ LN+ F +          ++ + YF    L+     
Subjt:  CKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPYFQP--LLHDDMS

Query:  LRRKGEPRTVVDDEQV
        L    +   +VDD++V
Subjt:  LRRKGEPRTVVDDEQV

TrEMBL top hitse value%identityAlignment
A0A5A7SN41 DUF1985 domain-containing protein5.4e-1027.55Show/hide
Query:  DTPTASDGEQPARKKSKKDVVKKETPHKKIDSRK--------------GKMVSTKKPDDEQHDTKKIPSSQLILHLIQRQCKPKKSSKLNIKINGKILTF
        ++P  S        K K+  V+K+   K + SRK              GK+ + KK +  + D ++   + +     +R CKPK +S+L   I G++L F
Subjt:  DTPTASDGEQPARKKSKKDVVKKETPHKKIDSRK--------------GKMVSTKKPDDEQHDTKKIPSSQLILHLIQRQCKPKKSSKLNIKINGKILTF

Query:  EMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPYFQP--LLHDDMSLRRKGEPRTVVDDEQV
         +REF+LI GL C  IP I+ + ++GGG+ K  YF+  + +  + LN+ F +          ++ + YF    L+     L    +   +VDD++V
Subjt:  EMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPYFQP--LLHDDMSLRRKGEPRTVVDDEQV

A0A5A7TF74 Protein Ycf2-like7.8e-0925.31Show/hide
Query:  RKTAKRDREDEGTGKNKPTKKRLAKKMNLMKINMGITSEESTDDVDNTDDDRDEETEFDTPTASDGEQPARKKSKKDVVKKETPHKKIDSRKGKMVST-K
        ++  K+ ++ EG    K   ++  K     ++      E+  D+    ++++DEE E +T    D        S    +  +T  +K  + KGK V T K
Subjt:  RKTAKRDREDEGTGKNKPTKKRLAKKMNLMKINMGITSEESTDDVDNTDDDRDEETEFDTPTASDGEQPARKKSKKDVVKKETPHKKIDSRKGKMVST-K

Query:  KPDDEQHDTKKIPSSQLILHLIQRQCKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVV
        K    + D ++   + +     +R CKPK +++L   I G++L F +REF+LI  L C  I  I  + ++GGG+ K  YF+    + R+ LN+ F +   
Subjt:  KPDDEQHDTKKIPSSQLILHLIQRQCKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVV

Query:  PLYPTEEELKQPYFQP--LLHDDMSLRRKGEPRTVVDDEQV
               ++ + YF    L+     L  + +   +VDD++V
Subjt:  PLYPTEEELKQPYFQP--LLHDDMSLRRKGEPRTVVDDEQV

A0A5A7U047 Protein Ycf2-like1.6e-1442.57Show/hide
Query:  SSQLILHLIQRQCKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPY
        SSQL+LHLIQR CKPK +S+L   I G++L F +REF+LI GL C  IP I+ + + GGG+ K  YF+    + R+ LN+ F +          ++ + Y
Subjt:  SSQLILHLIQRQCKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPY

Query:  F
        F
Subjt:  F

A0A5A7VJM3 Protein Ycf2-like7.8e-0929.35Show/hide
Query:  NMGITSEESTDDV------DNTDDDRDEETEFDTPTASDGEQPARKKSKKDVVKKETPH----KKIDSRKGKMVSTKKPDDEQHDTKKIPSSQLILHLIQ
        N+  +SEE T+D+         +     +    T T  +     +K+  K +V ++  +    KK    +GK+ + KK +  + D ++   + +     +
Subjt:  NMGITSEESTDDV------DNTDDDRDEETEFDTPTASDGEQPARKKSKKDVVKKETPH----KKIDSRKGKMVSTKKPDDEQHDTKKIPSSQLILHLIQ

Query:  RQCKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKL---EVVPLYP
        R CKPK +S+L   I G++L F +REF+LI GL C  IP I+ + ++GGG+ K  YF+    + R+ LN+ F +   EV   YP
Subjt:  RQCKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKL---EVVPLYP

A0A5D3DGJ6 Protein Ycf2-like6.0e-0926.15Show/hide
Query:  NMGITSEESTDDV------DNTDDDRDEETEFDTPTASDGEQPARKKSKKDVVKKETPH----KKIDSRKGKMVSTKKPDDEQHDTKKIPSSQLILHLIQ
        N+  +SEE T+D+         +     +    T T  +     +K+  K +V ++  +    KK    +GK+ + KK +  + D ++   + +     +
Subjt:  NMGITSEESTDDV------DNTDDDRDEETEFDTPTASDGEQPARKKSKKDVVKKETPH----KKIDSRKGKMVSTKKPDDEQHDTKKIPSSQLILHLIQ

Query:  RQCKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPYFQP--LLHDD
        R CKPK +S+L   I G++L F +REF+LI GL C  IP I+ + ++GGG+ K  YF+  + +  + LN+ F +          ++ + YF    L+   
Subjt:  RQCKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEEELKQPYFQP--LLHDD

Query:  MSLRRKGEPRTVVDDEQV
          L    +   +VDD++V
Subjt:  MSLRRKGEPRTVVDDEQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAAATGAATCCATCGGCAATTATCCCCCCCAGAAGCGTAAGACTGCTAAACGAGACCGTGAGGATGAAGGGACTGGGAAGAATAAACCAACCAAAAAAAGATT
AGCGAAAAAAATGAACCTGATGAAGATAAACATGGGAATAACGAGCGAAGAAAGTACTGACGATGTGGATAATACCGATGACGATAGAGACGAAGAAACTGAATTCGATA
CACCAACTGCAAGTGATGGAGAGCAACCTGCCAGGAAGAAGAGTAAGAAGGATGTTGTGAAAAAAGAGACCCCCCATAAGAAGATTGACTCGAGGAAGGGGAAAATGGTC
TCAACAAAGAAACCTGATGACGAACAACATGATACAAAAAAGATACCATCCTCTCAACTTATTCTTCATCTAATCCAACGACAATGCAAACCAAAGAAGTCCTCCAAATT
GAACATCAAAATCAATGGTAAGATCTTGACGTTCGAGATGCGAGAATTTTCATTGATTAGGGGACTAAACTGTGATCCAATCCCACAAATTGACAGAGACAGACTGGAAG
GTGGGGGGAAATTCAAGAACGAATACTTCGATGAGGAAGATGGAATGAAGAGGAAGACGCTAAATATCGCATTTAAGTTAGAGGTTGTGCCCCTATACCCCACAGAGGAA
GAACTCAAACAACCTTACTTTCAACCACTTCTACATGATGATATGTCATTGCGTAGAAAAGGTGAGCCTAGAACTGTTGTTGATGACGAACAAGTTATTCCACTCAGCTT
TTTCATAGGATCTACATCAACTGATCACTGCCTAGAAACAATTGAAAAGCAACACAATGACATAGTCGAGAAGCTCGATGAGGTCGTGGCAACAATCAATATTGTAACTA
ATTATTTGAGGAAGATATACAACGATGAGGAAACCACCCGATCAAGGTTTATGATGCATGGGGATGAGGCTCGAGATAAAGACAACGTCGTGAAGAAAACAACTGCGATG
ACCATAGGCTTGAGAAAAACCCCCGACCTACAAAAAAGGACGATGACACTAGACCTAGCGGAGGACAACGAGATCGAAATGTACCTGCAGCTGTGGGATTGGAAAATACA
ACGCCATCTATGGGTTAGGAGGGTGGAACCGAGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAAATGAATCCATCGGCAATTATCCCCCCCAGAAGCGTAAGACTGCTAAACGAGACCGTGAGGATGAAGGGACTGGGAAGAATAAACCAACCAAAAAAAGATT
AGCGAAAAAAATGAACCTGATGAAGATAAACATGGGAATAACGAGCGAAGAAAGTACTGACGATGTGGATAATACCGATGACGATAGAGACGAAGAAACTGAATTCGATA
CACCAACTGCAAGTGATGGAGAGCAACCTGCCAGGAAGAAGAGTAAGAAGGATGTTGTGAAAAAAGAGACCCCCCATAAGAAGATTGACTCGAGGAAGGGGAAAATGGTC
TCAACAAAGAAACCTGATGACGAACAACATGATACAAAAAAGATACCATCCTCTCAACTTATTCTTCATCTAATCCAACGACAATGCAAACCAAAGAAGTCCTCCAAATT
GAACATCAAAATCAATGGTAAGATCTTGACGTTCGAGATGCGAGAATTTTCATTGATTAGGGGACTAAACTGTGATCCAATCCCACAAATTGACAGAGACAGACTGGAAG
GTGGGGGGAAATTCAAGAACGAATACTTCGATGAGGAAGATGGAATGAAGAGGAAGACGCTAAATATCGCATTTAAGTTAGAGGTTGTGCCCCTATACCCCACAGAGGAA
GAACTCAAACAACCTTACTTTCAACCACTTCTACATGATGATATGTCATTGCGTAGAAAAGGTGAGCCTAGAACTGTTGTTGATGACGAACAAGTTATTCCACTCAGCTT
TTTCATAGGATCTACATCAACTGATCACTGCCTAGAAACAATTGAAAAGCAACACAATGACATAGTCGAGAAGCTCGATGAGGTCGTGGCAACAATCAATATTGTAACTA
ATTATTTGAGGAAGATATACAACGATGAGGAAACCACCCGATCAAGGTTTATGATGCATGGGGATGAGGCTCGAGATAAAGACAACGTCGTGAAGAAAACAACTGCGATG
ACCATAGGCTTGAGAAAAACCCCCGACCTACAAAAAAGGACGATGACACTAGACCTAGCGGAGGACAACGAGATCGAAATGTACCTGCAGCTGTGGGATTGGAAAATACA
ACGCCATCTATGGGTTAGGAGGGTGGAACCGAGGAAATGA
Protein sequenceShow/hide protein sequence
MSSNESIGNYPPQKRKTAKRDREDEGTGKNKPTKKRLAKKMNLMKINMGITSEESTDDVDNTDDDRDEETEFDTPTASDGEQPARKKSKKDVVKKETPHKKIDSRKGKMV
STKKPDDEQHDTKKIPSSQLILHLIQRQCKPKKSSKLNIKINGKILTFEMREFSLIRGLNCDPIPQIDRDRLEGGGKFKNEYFDEEDGMKRKTLNIAFKLEVVPLYPTEE
ELKQPYFQPLLHDDMSLRRKGEPRTVVDDEQVIPLSFFIGSTSTDHCLETIEKQHNDIVEKLDEVVATINIVTNYLRKIYNDEETTRSRFMMHGDEARDKDNVVKKTTAM
TIGLRKTPDLQKRTMTLDLAEDNEIEMYLQLWDWKIQRHLWVRRVEPRK