CuGenDBv2

Gene ID	Tan0022434
Organism	Trichosanthes anguina (Snake gourd v1)
Description	BHLH domain-containing protein
Genome location	LG10:8357931..8359077
RNA-Seq Expression	Tan0022434
Synteny	Tan0022434
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain IPR036638 - Helix-loop-helix DNA-binding domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6582238.1 Transcription factor basic helix-loop-helix 95, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-80

86.87

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Query:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK
        MEA TDSV++L P ILPVHQSE A+N+ASTSRKRR+ LEAN GVQRKGREKRKEMSESFDVLQSLVPN+SPKATRE+IV+ETIQFIE LQKQL+RLE EK
Subjt:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK

Query:  KPVESVTVLPSTNSDS-SGGVIVSVSGNIVLFGIV-ASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNLKK
        KP+ESVT+LPSTNSDS  GGVIVSVS NIVLFGI+ ASVRRGMVTQILMAFERHQAEVLAANVAVSHG+LTLTVTASVHGYVENTIEQIRNDIL+LKK
Subjt:  KPVESVTVLPSTNSDS-SGGVIVSVSGNIVLFGIV-ASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNLKK

XP_022955986.1 uncharacterized protein LOC111457820 [Cucurbita moschata]

8.1e-81

87.37

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Query:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK
        MEA TDSV+SL P ILPVHQSE A+N+ASTSRKRR+ LEAN GVQRKGREKRKEMSESFDVLQSLVPN+SPKATRE+IV+ETIQFIE LQKQL+RLE EK
Subjt:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK

Query:  KPVESVTVLPSTNSDS-SGGVIVSVSGNIVLFGIV-ASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNLKK
        KP+ESVT+LPSTNSDS  GGVIVSVS NIVLFGI+ ASVRRGMVTQILMAFERHQAEVLAANVAVSHG+LTLTVTASVHGYVENTIEQIRNDIL+LKK
Subjt:  KPVESVTVLPSTNSDS-SGGVIVSVSGNIVLFGIV-ASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNLKK

XP_022979931.1 uncharacterized protein LOC111479473 [Cucurbita maxima]

3.8e-78

83.74

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Query:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK
        MEA TDSV+SL P ILPVHQSE A+N+ASTSRKR + LEAN G QRKGREKRKEMSESFDVLQSLVPN+SPKATRE+IV+ETIQFIE LQKQL+RLE EK
Subjt:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK

Query:  KPVESVTVLPSTNSDS------SGGVIVSVSGNIVLFGIV-ASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILN
        KP+ESVT+LPSTNSDS       GGVIVSVS NIVLFGI+ ASVRRGMVT+ILMAFERHQAEVLAANVAVSHG+LTLTVTASVHGYVENTIEQIRNDIL+
Subjt:  KPVESVTVLPSTNSDS------SGGVIVSVSGNIVLFGIV-ASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILN

Query:  LKK
        LKK
Subjt:  LKK

XP_023528352.1 uncharacterized protein LOC111791298 [Cucurbita pepo subsp. pepo]

4.0e-80

85.57

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Query:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK
        MEA TDSV+SL P ILPVHQSE A+N+ASTSRKRR+ LEAN GVQRKGREKRKEMSESFDVLQSLVPN+SPKATRE+IV+ETIQFIE LQKQL RLE EK
Subjt:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK

Query:  KPVESVTVLPSTNSDS----SGGVIVSVSGNIVLFGIV-ASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNLK
        KP+ESVT+LPSTNSDS     GGVIVSVS NIVLFGI+ ASVRRGMVTQILMAFERHQAEVLAANVAVSHG+LTLTVTAS+HGYVENTIEQIRNDIL+LK
Subjt:  KPVESVTVLPSTNSDS----SGGVIVSVSGNIVLFGIV-ASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNLK

Query:  K
        K
Subjt:  K

XP_038885840.1 transcription factor bHLH95-like [Benincasa hispida]

3.0e-75

82.09

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Query:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK
        MEA TDSV+ LFP ILPVHQSE  + +AS SRKR + LEAN GVQ+K REKRKEMSESFDVLQSLVPN+SPKATRE+IV+ETIQFIEFLQKQL+RLE EK
Subjt:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK

Query:  KPVESVTVLPSTNSDSS----GGVIVSVSGNIVLFG-IVASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNLK
        K  ESVT+LPSTNSDSS    GGVIVSVSGNIVLFG I+ASV+RGMVTQILM FERHQAEVLAANVAVSHG+LTLTVTASVHGYVENTIE I+NDIL+LK
Subjt:  KPVESVTVLPSTNSDSS----GGVIVSVSGNIVLFG-IVASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNLK

Query:  K
        K
Subjt:  K

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5R7 BHLH domain-containing protein

1.2e-69

76.24

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Query:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK
        MEA +DSVI LFP ILPVH  E  +  AS SRKR + LEAN GVQ+K +EKRKEMSESFDVL+SLVPN+SPKATRE+IV+  IQFIEFLQKQL+RLE EK
Subjt:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK

Query:  KPVESVTVLPSTNSDSSG-----GVIVSVSGNIVLFG-IVASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNL
        K  ESV +LP+TNSDSSG     GVIVS+SGNIVLFG I+ASV+RG+VTQIL+ FERH+AEVLAANV VSHG+LTLTVTASVHGYVENTIEQIRNDIL L
Subjt:  KPVESVTVLPSTNSDSSG-----GVIVSVSGNIVLFG-IVASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNL

Query:  KK
        KK
Subjt:  KK

A0A1S4DSM0 transcription factor bHLH95-like

9.1e-70

75.62

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Query:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK
        MEA +DSV+ LFP ILP+H  E  +  AS SRKR + LEAN GVQ+K +EKRKEMSESFDVL+SLVPN+SPKATRE+IV+  IQFIEFLQKQL+RLE EK
Subjt:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK

Query:  KPVESVTVLPSTNSDSSG----GVIVSVSGNIVLFG-IVASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNLK
        K  ESVT+LP++NSDSSG    GVIVS+SGNIVLFG I+ASV+RGMVTQIL+ FERH+ EVLAANV VSHG+LTLTVTASVHGYVENTIEQIRNDIL+LK
Subjt:  KPVESVTVLPSTNSDSSG----GVIVSVSGNIVLFG-IVASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNLK

Query:  K
        K
Subjt:  K

A0A5A7U767 Transcription factor bHLH95-like

9.1e-70

75.62

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Query:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK
        MEA +DSV+ LFP ILP+H  E  +  AS SRKR + LEAN GVQ+K +EKRKEMSESFDVL+SLVPN+SPKATRE+IV+  IQFIEFLQKQL+RLE EK
Subjt:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK

Query:  KPVESVTVLPSTNSDSSG----GVIVSVSGNIVLFG-IVASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNLK
        K  ESVT+LP++NSDSSG    GVIVS+SGNIVLFG I+ASV+RGMVTQIL+ FERH+ EVLAANV VSHG+LTLTVTASVHGYVENTIEQIRNDIL+LK
Subjt:  KPVESVTVLPSTNSDSSG----GVIVSVSGNIVLFG-IVASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNLK

Query:  K
        K
Subjt:  K

A0A6J1GWN9 uncharacterized protein LOC111457820

3.9e-81

87.37

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Query:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK
        MEA TDSV+SL P ILPVHQSE A+N+ASTSRKRR+ LEAN GVQRKGREKRKEMSESFDVLQSLVPN+SPKATRE+IV+ETIQFIE LQKQL+RLE EK
Subjt:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK

Query:  KPVESVTVLPSTNSDS-SGGVIVSVSGNIVLFGIV-ASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNLKK
        KP+ESVT+LPSTNSDS  GGVIVSVS NIVLFGI+ ASVRRGMVTQILMAFERHQAEVLAANVAVSHG+LTLTVTASVHGYVENTIEQIRNDIL+LKK
Subjt:  KPVESVTVLPSTNSDS-SGGVIVSVSGNIVLFGIV-ASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNLKK

A0A6J1IS55 uncharacterized protein LOC111479473

1.8e-78

83.74

Show/hide

Query:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK
        MEA TDSV+SL P ILPVHQSE A+N+ASTSRKR + LEAN G QRKGREKRKEMSESFDVLQSLVPN+SPKATRE+IV+ETIQFIE LQKQL+RLE EK
Subjt:  MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK

Query:  KPVESVTVLPSTNSDS------SGGVIVSVSGNIVLFGIV-ASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILN
        KP+ESVT+LPSTNSDS       GGVIVSVS NIVLFGI+ ASVRRGMVT+ILMAFERHQAEVLAANVAVSHG+LTLTVTASVHGYVENTIEQIRNDIL+
Subjt:  KPVESVTVLPSTNSDS------SGGVIVSVSGNIVLFGIV-ASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILN

Query:  LKK
        LKK
Subjt:  LKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

1.7e-04

31.96

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Query:  LPVHQSEPA-DNRASTSRKRRKPLEANDGVQRK-----------GREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK
        LP H S P+ + + +T +K +K  + ND    +            RE+RK+M + F  L +L+P + PKA + +IV E +  I+ L++ L +LE +K
Subjt:  LPVHQSEPA-DNRASTSRKRRKPLEANDGVQRK-----------GREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEK

Sequences

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CDS sequence

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ATGGAGGCCGGCACCGACTCTGTGATTTCACTTTTCCCGCAGATATTGCCGGTGCATCAATCTGAACCCGCTGACAACAGGGCTTCGACCTCAAGAAAGCGTCGCAAACC
TTTGGAAGCCAACGATGGTGTTCAGAGGAAGGGGAGAGAGAAGAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCAATCTCTCGTACCGAATATCTCTCCCAAGGCTA
CGAGAGAGAGTATTGTTACCGAAACGATCCAGTTTATTGAGTTTCTGCAGAAGCAGTTGATAAGGCTGGAAACGGAGAAGAAGCCAGTGGAATCGGTAACGGTGCTTCCG
AGTACGAACTCGGATTCATCAGGCGGCGTCATCGTCTCGGTCTCCGGCAACATCGTGTTGTTTGGGATTGTTGCTTCTGTTCGTCGAGGTATGGTGACACAGATTTTAAT
GGCGTTTGAAAGACACCAGGCTGAAGTTCTAGCAGCAAATGTTGCAGTCAGCCATGGCGATTTGACTTTAACAGTCACAGCTTCTGTACACGGTTACGTAGAGAATACCA
TAGAGCAGATTAGAAACGATATCCTAAACTTGAAGAAGTAA

mRNA sequence

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AAAAAAATTAGCGAATCGAAACTGTAAAATCGGGAGTTGGAATTTTGAATCATAGTCTCTCTCTGCGCTCTGCAAGAAATTATTCTAACTGCTCATTTCTTCCACTTCAG
ACCAATCCTTCTTCTTTCTCTCTCTCACGCACATCCTGCAACTCTTTTCATTGCTGCATAAAAAGCCTCATCAATGGCAGAATAAGGGACAACAACAAGACGGCGCAAAG
AAGATTACCAAAAGCTTCTATTTGTAGTCATGGAGGCCGGCACCGACTCTGTGATTTCACTTTTCCCGCAGATATTGCCGGTGCATCAATCTGAACCCGCTGACAACAGG
GCTTCGACCTCAAGAAAGCGTCGCAAACCTTTGGAAGCCAACGATGGTGTTCAGAGGAAGGGGAGAGAGAAGAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCAATC
TCTCGTACCGAATATCTCTCCCAAGGCTACGAGAGAGAGTATTGTTACCGAAACGATCCAGTTTATTGAGTTTCTGCAGAAGCAGTTGATAAGGCTGGAAACGGAGAAGA
AGCCAGTGGAATCGGTAACGGTGCTTCCGAGTACGAACTCGGATTCATCAGGCGGCGTCATCGTCTCGGTCTCCGGCAACATCGTGTTGTTTGGGATTGTTGCTTCTGTT
CGTCGAGGTATGGTGACACAGATTTTAATGGCGTTTGAAAGACACCAGGCTGAAGTTCTAGCAGCAAATGTTGCAGTCAGCCATGGCGATTTGACTTTAACAGTCACAGC
TTCTGTACACGGTTACGTAGAGAATACCATAGAGCAGATTAGAAACGATATCCTAAACTTGAAGAAGTAATAGATTCCATTATTCACGAGATTCTTCCCTCTTTATTTAC
TACTAGGGGATGTTTAATACTTCTACAGAACTAGAAAGTGAAACAATACAATACAGAGAGTCATATATATTTTGGATTTTGCTTAAAAATCACGTTATTGAATTTTGATT
AAGATCATGTTGGGTTCAGCTTTTGATTTTAATTTTAATTCTAATTCTTATTTAGCAAGAAAA

Protein sequence

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MEAGTDSVISLFPQILPVHQSEPADNRASTSRKRRKPLEANDGVQRKGREKRKEMSESFDVLQSLVPNISPKATRESIVTETIQFIEFLQKQLIRLETEKKPVESVTVLP
STNSDSSGGVIVSVSGNIVLFGIVASVRRGMVTQILMAFERHQAEVLAANVAVSHGDLTLTVTASVHGYVENTIEQIRNDILNLKK

Tan0022434 (gene) of Snake gourd v1 genome