; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0022435 (gene) of Snake gourd v1 genome

Gene IDTan0022435
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionnuclear transcription factor Y subunit B-4-like
Genome locationLG09:12144803..12145171
RNA-Seq ExpressionTan0022435
SyntenyTan0022435
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold
IPR027113 - Transcription factor NFYB/HAP3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050888.1 beta-galactosidase 15-like [Cucumis melo var. makuwa]8.2e-3971.54Show/hide
Query:  MGENWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKS
        MGENWE LQLP ANV R+MKKI+PQ  KISKEAK+TMQECA EFISFVTSEAAQKCH +NRRTLN DDIYWAFGSLGLDNYAEAS+  LLKFREAE +K+
Subjt:  MGENWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKS

Query:  HKKSSQFQEQ----GEHDHNDDH
          K+  FQ       +H++N +H
Subjt:  HKKSSQFQEQ----GEHDHNDDH

XP_008451143.1 PREDICTED: beta-galactosidase 15-like [Cucumis melo]3.7e-3973.17Show/hide
Query:  MGENWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKS
        MGENWE LQLP ANV R+MKKI+PQ  KISKEAK+TMQECA EFISFVTSEAAQKCH +NRRTLN DDIYWAFGSLGLDNYAEAS+  LLKFREAE +K+
Subjt:  MGENWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKS

Query:  HKKSSQFQEQGEHDHN-DDHKSY
          K+  FQ    H H  +DH S+
Subjt:  HKKSSQFQEQGEHDHN-DDHKSY

XP_022145916.1 nuclear transcription factor Y subunit B-4-like [Momordica charantia]5.0e-4476.07Show/hide
Query:  ENWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKSHK
        +NWE+LQLPSANVGRLMKKI+PQTSKISKEAKQTMQECA EFISFVTSEAA+KC+++NRRTLN +DIYWAFG+LGLDNYA+A+AKYLL +R+A+T+K H 
Subjt:  ENWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKSHK

Query:  KSSQFQEQGEHDHNDDH
        K   FQ+QGEH+++DD+
Subjt:  KSSQFQEQGEHDHNDDH

XP_022968852.1 nuclear transcription factor Y subunit B-4-like [Cucurbita maxima]2.6e-3775.44Show/hide
Query:  MGE-NWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVK
        MGE N + LQLP ANVGRLMKKILPQ +KISKEAK TMQECA EFISFVTSEAA+KCHKDNRRTLN DDI WAFGS GLDNYAEASAKYLLK+R+ E + 
Subjt:  MGE-NWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVK

Query:  SHKKSSQFQEQGEH
        +  K++  +EQ EH
Subjt:  SHKKSSQFQEQGEH

XP_038880507.1 nuclear transcription factor Y subunit B-4-like [Benincasa hispida]1.0e-4174.8Show/hide
Query:  MGENWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKS
        MGENWE LQLP ANVGR+MKKILPQ +KISKEAK+TMQECA EFISFV SEAA+KCHK+NRRTLN DDI WA GS GLDNYAE SAKYLLKFREAE +K+
Subjt:  MGENWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKS

Query:  HKKSSQFQ---EQGEHDHNDDHK
          K+  FQ   +QGE D ND+H+
Subjt:  HKKSSQFQ---EQGEHDHNDDHK

TrEMBL top hitse value%identityAlignment
A0A1S3BQ87 Beta-galactosidase1.8e-3973.17Show/hide
Query:  MGENWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKS
        MGENWE LQLP ANV R+MKKI+PQ  KISKEAK+TMQECA EFISFVTSEAAQKCH +NRRTLN DDIYWAFGSLGLDNYAEAS+  LLKFREAE +K+
Subjt:  MGENWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKS

Query:  HKKSSQFQEQGEHDHN-DDHKSY
          K+  FQ    H H  +DH S+
Subjt:  HKKSSQFQEQGEHDHN-DDHKSY

A0A5D3CFV4 Beta-galactosidase 15-like4.0e-3971.54Show/hide
Query:  MGENWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKS
        MGENWE LQLP ANV R+MKKI+PQ  KISKEAK+TMQECA EFISFVTSEAAQKCH +NRRTLN DDIYWAFGSLGLDNYAEAS+  LLKFREAE +K+
Subjt:  MGENWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKS

Query:  HKKSSQFQEQ----GEHDHNDDH
          K+  FQ       +H++N +H
Subjt:  HKKSSQFQEQ----GEHDHNDDH

A0A6J1CXT8 nuclear transcription factor Y subunit B-4-like2.4e-4476.07Show/hide
Query:  ENWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKSHK
        +NWE+LQLPSANVGRLMKKI+PQTSKISKEAKQTMQECA EFISFVTSEAA+KC+++NRRTLN +DIYWAFG+LGLDNYA+A+AKYLL +R+A+T+K H 
Subjt:  ENWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKSHK

Query:  KSSQFQEQGEHDHNDDH
        K   FQ+QGEH+++DD+
Subjt:  KSSQFQEQGEHDHNDDH

A0A6J1HDY6 nuclear transcription factor Y subunit B-4-like1.3e-3774.78Show/hide
Query:  MGE-NWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVK
        MGE N + LQLP ANVGRLMKKILPQ +KISKEAK TMQECA EFISFVTSEAA+KCHKDNRRTLN DDI WAFGS GLDNYAEASAKYLLK+R+ E + 
Subjt:  MGE-NWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVK

Query:  SHKKSSQFQEQGEHD
        +  K++   EQ +HD
Subjt:  SHKKSSQFQEQGEHD

A0A6J1HUN8 nuclear transcription factor Y subunit B-4-like1.3e-3775.44Show/hide
Query:  MGE-NWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVK
        MGE N + LQLP ANVGRLMKKILPQ +KISKEAK TMQECA EFISFVTSEAA+KCHKDNRRTLN DDI WAFGS GLDNYAEASAKYLLK+R+ E + 
Subjt:  MGE-NWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVK

Query:  SHKKSSQFQEQGEH
        +  K++  +EQ EH
Subjt:  SHKKSSQFQEQGEH

SwissProt top hitse value%identityAlignment
O04027 Nuclear transcription factor Y subunit B-44.2e-3065.98Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKS-HKKSS
        LP ANVGRLMK+ILP  +KISKEAKQT+QECA EFISFVT EA++KCH++NR+T+N DDI+WA  +LGLDNYA+A  ++L K+REAE  ++ H K S
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKS-HKKSS

O23310 Nuclear transcription factor Y subunit B-31.9e-2250Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKSHKKSSQFQE
        LP ANV R+MKK LP  +KISK+AK+T+QEC  EFISF+T EA+ KC ++ R+T+N DD+ WA  +LG ++Y E    YL K+RE E  K+     Q  +
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKSHKKSSQFQE

Query:  QG
        +G
Subjt:  QG

O82248 Nuclear transcription factor Y subunit B-57.0e-2559.38Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFR--EAETVKSHKK
        LP ANVGR+MK ILP  +K+SKEAK+TMQEC  EFISFVT EA+ KCHK+ R+T+N DDI WA  +LG D+YA    KYL ++R  E E    H K
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFR--EAETVKSHKK

Q32KW0 Nuclear transcription factor Y subunit beta1.9e-2254.55Show/hide
Query:  LQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREA
        + LP ANV R+MK  +PQT KI+K+AK+ +QEC  EFISF+TSEA+++CH++ R+T+N +DI +A  +LG D+Y E    YL KFREA
Subjt:  LQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREA

Q9SIT9 Nuclear transcription factor Y subunit B-75.0e-2350.89Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFR--EAETVKSHKKSSQF
        LP ANVGR+MKK+LP   KISK+AK+T+QEC  EFISFVT EA+ KC ++ R+T+N DDI WA  +LG ++Y      YL K+R  E E V S K+  Q 
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFR--EAETVKSHKKSSQF

Query:  QEQGEHDHNDDH
        Q+Q +    + H
Subjt:  QEQGEHDHNDDH

Arabidopsis top hitse value%identityAlignment
AT1G09030.1 nuclear factor Y, subunit B43.0e-3165.98Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKS-HKKSS
        LP ANVGRLMK+ILP  +KISKEAKQT+QECA EFISFVT EA++KCH++NR+T+N DDI+WA  +LGLDNYA+A  ++L K+REAE  ++ H K S
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKS-HKKSS

AT2G13570.1 nuclear factor Y, subunit B73.6e-2450.89Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFR--EAETVKSHKKSSQF
        LP ANVGR+MKK+LP   KISK+AK+T+QEC  EFISFVT EA+ KC ++ R+T+N DDI WA  +LG ++Y      YL K+R  E E V S K+  Q 
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFR--EAETVKSHKKSSQF

Query:  QEQGEHDHNDDH
        Q+Q +    + H
Subjt:  QEQGEHDHNDDH

AT2G47810.1 nuclear factor Y, subunit B55.0e-2659.38Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFR--EAETVKSHKK
        LP ANVGR+MK ILP  +K+SKEAK+TMQEC  EFISFVT EA+ KCHK+ R+T+N DDI WA  +LG D+YA    KYL ++R  E E    H K
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFR--EAETVKSHKK

AT4G14540.1 nuclear factor Y, subunit B31.4e-2350Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKSHKKSSQFQE
        LP ANV R+MKK LP  +KISK+AK+T+QEC  EFISF+T EA+ KC ++ R+T+N DD+ WA  +LG ++Y E    YL K+RE E  K+     Q  +
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKSHKKSSQFQE

Query:  QG
        +G
Subjt:  QG

AT5G47640.1 nuclear factor Y, subunit B23.9e-2351.85Show/hide
Query:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKSHKKSSQF-Q
        LP ANV R+MKK LP  +KISK+AK+TMQEC  EFISFVT EA+ KC K+ R+T+N DD+ WA  +LG ++Y E    YL +FRE E  ++     Q   
Subjt:  LPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKSHKKSSQF-Q

Query:  EQGEHDHN
        E GEH  +
Subjt:  EQGEHDHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGAATTGGGAAAGGCTTCAGCTGCCAAGTGCTAATGTTGGTAGATTGATGAAGAAGATACTTCCCCAAACGTCAAAGATTTCAAAAGAAGCCAAACAAACAAT
GCAAGAATGTGCAGTGGAGTTCATTAGCTTCGTAACAAGTGAAGCAGCACAAAAATGTCATAAAGACAATCGTAGAACTCTCAACGCAGACGATATTTATTGGGCTTTTG
GTTCTCTTGGCTTAGATAACTATGCGGAGGCTTCCGCCAAGTATTTGCTCAAATTTAGAGAAGCTGAAACAGTGAAGAGTCATAAGAAAAGCAGTCAATTTCAAGAACAA
GGAGAACACGACCACAATGATGATCATAAATCTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAGAATTGGGAAAGGCTTCAGCTGCCAAGTGCTAATGTTGGTAGATTGATGAAGAAGATACTTCCCCAAACGTCAAAGATTTCAAAAGAAGCCAAACAAACAAT
GCAAGAATGTGCAGTGGAGTTCATTAGCTTCGTAACAAGTGAAGCAGCACAAAAATGTCATAAAGACAATCGTAGAACTCTCAACGCAGACGATATTTATTGGGCTTTTG
GTTCTCTTGGCTTAGATAACTATGCGGAGGCTTCCGCCAAGTATTTGCTCAAATTTAGAGAAGCTGAAACAGTGAAGAGTCATAAGAAAAGCAGTCAATTTCAAGAACAA
GGAGAACACGACCACAATGATGATCATAAATCTTATTGA
Protein sequenceShow/hide protein sequence
MGENWERLQLPSANVGRLMKKILPQTSKISKEAKQTMQECAVEFISFVTSEAAQKCHKDNRRTLNADDIYWAFGSLGLDNYAEASAKYLLKFREAETVKSHKKSSQFQEQ
GEHDHNDDHKSY