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Tan0022450 (gene) of Snake gourd v1 genome

Gene IDTan0022450
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG08:16570506..16571576
RNA-Seq ExpressionTan0022450
SyntenyTan0022450
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]2.4e-3235.98Show/hide
Query:  MESMKLGLMVEKLKLSSEEETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWY
        MES  +    EKL L  +      ++    +   Q L  +L+ K+++ K IN E F+  I  IW T N++ +E +G N+F  RF++  DR++I++  PW 
Subjt:  MESMKLGLMVEKLKLSSEEETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWY

Query:  FDRAILLIEESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCP
        FD+ +L++ E+ GS +  D +FRYV FW+ LHNLP A L  ++    G  +    + D  +S  C G  +R+R+ +DV   LKRGL V +G   +     
Subjt:  FDRAILLIEESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCP

Query:  ATYEKLPDFCYQCG
          YE+LP+FCY CG
Subjt:  ATYEKLPDFCYQCG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]9.8e-3436.1Show/hide
Query:  EKLKLSSEE-ETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWYFDRAILLIE
        +K KL+SEE E  + V+ D +  + Q L  +L+ K L+++ I+ ++  + +   W   +QL +E +G NLFL  F    D  ++M   PW+FD+A+++++
Subjt:  EKLKLSSEE-ETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWYFDRAILLIE

Query:  ESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCPATYEKLPDF
        +   S    + EF  V FW+HL +LP + L   MA   GN I  F+  D ++  F WG+S+R+R+ +D+T+ L+RG+ + I       W P  YE+LPDF
Subjt:  ESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCPATYEKLPDF

Query:  CYQCG
        CY CG
Subjt:  CYQCG

XP_042958061.1 uncharacterized protein LOC122293581 [Carya illinoinensis]6.6e-3030.21Show/hide
Query:  LFKSGFALQLITNNCCLIET-MESMKLGLMVEKLKLSSEEETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNL
        +F  GF  + + ++  L    ME   L  + E LKL+ EE+  I V  ++I  ST   +  ++   +S K  N       +PKIW+   ++  ++VG N 
Subjt:  LFKSGFALQLITNNCCLIET-MESMKLGLMVEKLKLSSEEETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNL

Query:  FLSRFESMGDRRKIMDHEPWYFDRAILLIEESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVT
        FL  F+S  D+ ++++  PW FD+++L I++  G+    + +F +  FW+  H++P AG+   M    G+ +   +  D   S+ CWG  +R+++ +D+T
Subjt:  FLSRFESMGDRRKIMDHEPWYFDRAILLIEESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVT

Query:  RSLKRGLMVKIGVMAEDIWCPATYEKLPDFCYQCG
        + L RG    I    E  W P  YE++ +FCY CG
Subjt:  RSLKRGLMVKIGVMAEDIWCPATYEKLPDFCYQCG

XP_042961334.1 uncharacterized protein LOC122296019 [Carya illinoinensis]1.1e-2931.55Show/hide
Query:  MVEKLKLSSEEETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWYFDRAILLI
        + E LKL+ EE+  I V  +++  S    +  L+   +S K  N       +PKIW+   ++  ++VG N+FL  F++  D+ ++M+  PW FD+ +L I
Subjt:  MVEKLKLSSEEETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWYFDRAILLI

Query:  EESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCPATYEKLPD
        ++  G+    D +F    FW+  H++P AG++  M    GN +   +  D + S+ CWG  +R+++ +D+T+ L RG  + +    E  W P  YE+L +
Subjt:  EESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCPATYEKLPD

Query:  FCYQCG
        FCY CG
Subjt:  FCYQCG

XP_042972822.1 uncharacterized protein LOC122304628 [Carya illinoinensis]5.0e-3031.55Show/hide
Query:  MVEKLKLSSEEETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWYFDRAILLI
        + E LKL+ EE+  I V  +++  S    +  L+   +S K  N       +PKIW+   ++  ++VG N+FL  F +  D+ ++M+  PW FD+ +L I
Subjt:  MVEKLKLSSEEETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWYFDRAILLI

Query:  EESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCPATYEKLPD
        ++  G+    D +F    FW+  H++P AG++  M    GN +   +  D + S+ CWG  +R+++ +D+T+ L RG  + +    E  W P  YE+L +
Subjt:  EESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCPATYEKLPD

Query:  FCYQCG
        FCY CG
Subjt:  FCYQCG

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein1.2e-3235.98Show/hide
Query:  MESMKLGLMVEKLKLSSEEETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWY
        MES  +    EKL L  +      ++    +   Q L  +L+ K+++ K IN E F+  I  IW T N++ +E +G N+F  RF++  DR++I++  PW 
Subjt:  MESMKLGLMVEKLKLSSEEETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWY

Query:  FDRAILLIEESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCP
        FD+ +L++ E+ GS +  D +FRYV FW+ LHNLP A L  ++    G  +    + D  +S  C G  +R+R+ +DV   LKRGL V +G   +     
Subjt:  FDRAILLIEESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCP

Query:  ATYEKLPDFCYQCG
          YE+LP+FCY CG
Subjt:  ATYEKLPDFCYQCG

A0A5C7HB59 Uncharacterized protein1.0e-2831.31Show/hide
Query:  MESMKLGLMVEKLKLSSEEETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWY
        M ++++  + E L L+ E+   + + ++   +  + +   L+ K LS K +N E F+  I +IWS   Q+ +E VG NLF+  F +  DR +++   PW+
Subjt:  MESMKLGLMVEKLKLSSEEETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWY

Query:  FDRAILLIEESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCP
        F  +++++E+S G        F    FWV +H++P   +  + A     +I   ++   S+S+ CWG  M +++++D+ + LKR L +KIG   E     
Subjt:  FDRAILLIEESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCP

Query:  ATYEKLPDFCYQCG
          YEKLPDFCY CG
Subjt:  ATYEKLPDFCYQCG

A0A6J1BSZ1 uncharacterized protein LOC1110054812.7e-2932.52Show/hide
Query:  EKLKLSSEEE-TPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWS-TTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWYFDRAILLI
        +  KL+SEE+   + ++   ++ + + L+ +L+CK LS++ I+  + +  +   W        ++ +GFN+FL  F    DR +I+   PW FDRA+++I
Subjt:  EKLKLSSEEE-TPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWS-TTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWYFDRAILLI

Query:  EESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCPATYEKLPD
        +      + +D +FR V  WVH  +L  A +   MA   GN I  F   + + + FCWGS +R+R++ DV + L RG+ + +       W P  YE+LPD
Subjt:  EESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCPATYEKLPD

Query:  FCYQCG
        F Y CG
Subjt:  FCYQCG

A0A6J1DU55 uncharacterized protein LOC1110231354.8e-3436.1Show/hide
Query:  EKLKLSSEE-ETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWYFDRAILLIE
        +K KL+SEE E  + V+ D +  + Q L  +L+ K L+++ I+ ++  + +   W   +QL +E +G NLFL  F    D  ++M   PW+FD+A+++++
Subjt:  EKLKLSSEE-ETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWYFDRAILLIE

Query:  ESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCPATYEKLPDF
        +   S    + EF  V FW+HL +LP + L   MA   GN I  F+  D ++  F WG+S+R+R+ +D+T+ L+RG+ + I       W P  YE+LPDF
Subjt:  ESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCPATYEKLPDF

Query:  CYQCG
        CY CG
Subjt:  CYQCG

A0A7N2R0C3 Reverse transcriptase domain-containing protein1.6e-2930.95Show/hide
Query:  KLGLMVEKLKLSSEEETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWYFDRA
        +L ++ ++LK++ EEE  IL+ D+ +  + +  +  +  K +SRK + +E  R+ +  +W     +++  +G  LFL  FE   D+R++MD  PW++++ 
Subjt:  KLGLMVEKLKLSSEEETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEPWYFDRA

Query:  ILLIEESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCPATYE
        ++L +E  G     D   ++  FWV ++NLP      +     G  I  FI+ D+ ++   WG+ +R+R+++DVTR L RG  + +    E  W    YE
Subjt:  ILLIEESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCPATYE

Query:  KLPDFCYQCG
        +LP+FCY+CG
Subjt:  KLPDFCYQCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATAACTTTGGATCTATGCAGTTGGAAATTAATAAGAAAGGGGTTTAGTGAGGACTCTCTCGACAGAGAATTCCATCCTCCCGCCGACGCCGGCGCAAGTGCGAT
CAAGGTAGGGATGCTGATGGATTACGGCTGGGAATGTTTTTTGGCGCCTTTAGTGCGATTTTTCATGGAAATATTATGGAAATCTGGACGTTTTGAGTACCGATTGCATA
AAGATTCACCCACATTAAGGAAGATTCAGAGGATTATCTTACAATGGAAGGATTTGATCCGTTGGACGAAATGGATACGTTGGACTCTATTTAAATCAGGCTTTGCATTG
CAACTGATCACTAACAATTGCTGTTTAATAGAAACAATGGAGTCAATGAAATTGGGTTTAATGGTCGAGAAATTAAAGCTATCTTCGGAAGAGGAGACACCCATTTTGGT
GGAGGACGACGACATTGACGAAAGTACCCAACTGCTACAATCAGCTCTGCTATGTAAAAGCCTTTCGCGTAAACCGATCAACCTAGAATTATTCAGACAAGCTATTCCTA
AAATCTGGAGTACTACAAATCAGTTGAGAATTGAAAAGGTGGGATTTAATCTCTTCCTCTCCAGATTTGAATCCATGGGGGACAGACGCAAGATCATGGACCATGAACCC
TGGTATTTTGACAGAGCGATTCTTCTTATTGAGGAATCCAGAGGATCATGTCGTTTCATTGACCACGAGTTCCGGTATGTATGCTTTTGGGTTCATCTACATAACCTTCC
CCCTGCAGGTCTAGCAACGAAGATGGCCCCAATCTATGGCAACCGGATTGAGACCTTCATAAAAGCAGATATATCGGACTCAAAATTCTGTTGGGGGAGCTCAATGAGGT
TGCGAATCAAAGTGGACGTGACCAGGTCACTAAAGAGAGGTCTGATGGTGAAAATCGGAGTGATGGCTGAAGACATTTGGTGCCCGGCTACGTACGAGAAACTCCCTGAC
TTCTGTTATCAATGTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATAACTTTGGATCTATGCAGTTGGAAATTAATAAGAAAGGGGTTTAGTGAGGACTCTCTCGACAGAGAATTCCATCCTCCCGCCGACGCCGGCGCAAGTGCGAT
CAAGGTAGGGATGCTGATGGATTACGGCTGGGAATGTTTTTTGGCGCCTTTAGTGCGATTTTTCATGGAAATATTATGGAAATCTGGACGTTTTGAGTACCGATTGCATA
AAGATTCACCCACATTAAGGAAGATTCAGAGGATTATCTTACAATGGAAGGATTTGATCCGTTGGACGAAATGGATACGTTGGACTCTATTTAAATCAGGCTTTGCATTG
CAACTGATCACTAACAATTGCTGTTTAATAGAAACAATGGAGTCAATGAAATTGGGTTTAATGGTCGAGAAATTAAAGCTATCTTCGGAAGAGGAGACACCCATTTTGGT
GGAGGACGACGACATTGACGAAAGTACCCAACTGCTACAATCAGCTCTGCTATGTAAAAGCCTTTCGCGTAAACCGATCAACCTAGAATTATTCAGACAAGCTATTCCTA
AAATCTGGAGTACTACAAATCAGTTGAGAATTGAAAAGGTGGGATTTAATCTCTTCCTCTCCAGATTTGAATCCATGGGGGACAGACGCAAGATCATGGACCATGAACCC
TGGTATTTTGACAGAGCGATTCTTCTTATTGAGGAATCCAGAGGATCATGTCGTTTCATTGACCACGAGTTCCGGTATGTATGCTTTTGGGTTCATCTACATAACCTTCC
CCCTGCAGGTCTAGCAACGAAGATGGCCCCAATCTATGGCAACCGGATTGAGACCTTCATAAAAGCAGATATATCGGACTCAAAATTCTGTTGGGGGAGCTCAATGAGGT
TGCGAATCAAAGTGGACGTGACCAGGTCACTAAAGAGAGGTCTGATGGTGAAAATCGGAGTGATGGCTGAAGACATTTGGTGCCCGGCTACGTACGAGAAACTCCCTGAC
TTCTGTTATCAATGTGGGTGA
Protein sequenceShow/hide protein sequence
MSITLDLCSWKLIRKGFSEDSLDREFHPPADAGASAIKVGMLMDYGWECFLAPLVRFFMEILWKSGRFEYRLHKDSPTLRKIQRIILQWKDLIRWTKWIRWTLFKSGFAL
QLITNNCCLIETMESMKLGLMVEKLKLSSEEETPILVEDDDIDESTQLLQSALLCKSLSRKPINLELFRQAIPKIWSTTNQLRIEKVGFNLFLSRFESMGDRRKIMDHEP
WYFDRAILLIEESRGSCRFIDHEFRYVCFWVHLHNLPPAGLATKMAPIYGNRIETFIKADISDSKFCWGSSMRLRIKVDVTRSLKRGLMVKIGVMAEDIWCPATYEKLPD
FCYQCG