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Tan0022468 (gene) of Snake gourd v1 genome

Gene IDTan0022468
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLate embryogenesis abundant protein
Genome locationLG01:10154675..10155782
RNA-Seq ExpressionTan0022468
SyntenyTan0022468
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148978.1 uncharacterized protein LOC101205531 [Cucumis sativus]6.8e-4793Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN
        MATAFVRGA TMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+SHVGGE TPW+LDGRTGIYYPKGHEKVL  IPDGGGAAVNTQVNWF+DEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN
XP_008451903.1 PREDICTED: uncharacterized protein LOC103493056 [Cucumis melo]8.0e-4894Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN
        MATAFVRGA TMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+SHVGGEATPW+LDGRTGIYYPKGHEKVL+GIPDGGGA VNTQVNWF+DEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN
XP_022931383.1 uncharacterized protein LOC111437581 [Cucurbita moschata]1.3e-4592.08Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN
        MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKS V GE TPW+LDGRTGIYYPKGHE VLE IP+GGGAAVNTQVNWF+DEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN

Query:  S
        S
Subjt:  S
XP_023552297.1 uncharacterized protein LOC111810002 [Cucurbita pepo subsp. pepo]2.8e-4591.09Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN
        MATAF+RGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKS V GE TPW+LDGRTGIYYPKGHE VLE IP+GGGAAVNTQVNWF+DEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN

Query:  S
        S
Subjt:  S
XP_038884831.1 uncharacterized protein LOC120075477 [Benincasa hispida]1.8e-4794Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN
        MATAF RGAQTMNSMFFKPIGRKGFHRKSSSPDM+RERVETESKE+KSNKSHVGGEATPW+LDGRTGIYYPKGHEKVLE IPDGGGAAVNTQVNWF+DEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN
TrEMBL top hitse value%identityAlignment
A0A0A0KX78 Uncharacterized protein3.3e-4793Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN
        MATAFVRGA TMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+SHVGGE TPW+LDGRTGIYYPKGHEKVL  IPDGGGAAVNTQVNWF+DEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN
A0A1S3BTQ2 uncharacterized protein LOC1034930563.9e-4894Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN
        MATAFVRGA TMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+SHVGGEATPW+LDGRTGIYYPKGHEKVL+GIPDGGGA VNTQVNWF+DEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN
A0A6J1C4X8 uncharacterized protein LOC1110083061.8e-4593.07Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN
        MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKE+KSNKSHV GEATPWMLD RTGIYYPKGHEKVLE IPDGGGAAVN QVN F DEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN

Query:  S
        S
Subjt:  S
A0A6J1EYH0 uncharacterized protein LOC1114375816.2e-4692.08Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN
        MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKS V GE TPW+LDGRTGIYYPKGHE VLE IP+GGGAAVNTQVNWF+DEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN

Query:  S
        S
Subjt:  S
A0A6J1J914 uncharacterized protein LOC1114828451.8e-4591.09Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN
        MATAFVRGAQ+MNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKS V GE TPW+LDGRTGIYYPKGHE VLE IP+GGGAAVNTQVNWF+DEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDEN

Query:  S
        S
Subjt:  S
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73120.1 unknown protein3.0e-1646.53Show/hide
Query:  RGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETE----SKELKSNKSHVG-GE----ATPWMLDGRTGIYYPKGHEKVLEGI-PDGGGAAVNTQVNWF
        RGAQTMN+MF KP+ RK  H+KS+S D++R+ V+TE     +E+K+ +   G GE    A+ W+    TGIYYPKG EKV++ + P   G+  +  VNWF
Subjt:  RGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETE----SKELKSNKSHVG-GE----ATPWMLDGRTGIYYPKGHEKVLEGI-PDGGGAAVNTQVNWF

Query:  S
        S
Subjt:  S

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTGCATTTGTGAGAGGGGCCCAGACAATGAACTCCATGTTCTTCAAACCGATCGGGCGAAAGGGCTTCCACAGGAAAAGCTCTTCTCCAGATATGATGAGGGA
GAGAGTTGAAACGGAAAGCAAAGAACTGAAGAGCAATAAGAGCCATGTGGGAGGTGAGGCAACTCCATGGATGCTCGATGGGCGAACTGGAATTTATTATCCTAAAGGCC
ATGAGAAGGTCCTTGAGGGCATTCCCGACGGTGGTGGGGCTGCAGTTAACACCCAGGTCAATTGGTTTAGCGACGAAAACAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTGCATTTGTGAGAGGGGCCCAGACAATGAACTCCATGTTCTTCAAACCGATCGGGCGAAAGGGCTTCCACAGGAAAAGCTCTTCTCCAGATATGATGAGGGA
GAGAGTTGAAACGGAAAGCAAAGAACTGAAGAGCAATAAGAGCCATGTGGGAGGTGAGGCAACTCCATGGATGCTCGATGGGCGAACTGGAATTTATTATCCTAAAGGCC
ATGAGAAGGTCCTTGAGGGCATTCCCGACGGTGGTGGGGCTGCAGTTAACACCCAGGTCAATTGGTTTAGCGACGAAAACAGTTAA
Protein sequenceShow/hide protein sequence
MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVGGEATPWMLDGRTGIYYPKGHEKVLEGIPDGGGAAVNTQVNWFSDENS