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Tan0022479 (gene) of Snake gourd v1 genome

Gene IDTan0022479
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLipid transfer protein
Genome locationLG04:66529714..66529998
RNA-Seq ExpressionTan0022479
SyntenyTan0022479
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7112276.1 hypothetical protein RHSIM_RhsimUnG0245900 [Rhododendron simsii]1.8e-2258.95Show/hide
Query:  MKKGFLMTGLCLLVVVAV-TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        MKKG   + LC LVVV V   A+V  AVTCNP+EL PCL A+T   APS+ CCNK+KE KPC CGY+KN     YV S  AKK++S CGVP+P C
Subjt:  MKKGFLMTGLCLLVVVAV-TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

KAF7129124.1 hypothetical protein RHSIM_Rhsim10G0070900 [Rhododendron simsii]1.8e-2258.95Show/hide
Query:  MKKGFLMTGLCLLVVVAV-TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        MKKG   + LC LVVV V   A+V  AVTCNP+EL PCL A+T   APS+ CCNK+KE KPC CGY+KN     YV S  AKK++S CGVP+P C
Subjt:  MKKGFLMTGLCLLVVVAV-TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

KAF7130843.1 hypothetical protein RHSIM_Rhsim10G0072400 [Rhododendron simsii]2.3e-2055.21Show/hide
Query:  MKKGFLMTGLCLLVVVAV--TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        MKKG   + LC LVVV V    A+V  AVTCN  EL PCL A+T S APS+ CCNK++E +PC CGY+KN  Y  YV S +A+++ S CGVP P+C
Subjt:  MKKGFLMTGLCLLVVVAV--TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

KAF7130851.1 hypothetical protein RHSIM_Rhsim10G0071000 [Rhododendron simsii]2.0e-2156.84Show/hide
Query:  MKKGFLMTGLCLLVVVAV-TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        MKKG   + LC LVVV V   A+V  AVTCNP EL PCL  +T   APS+ CCNK+KE KPC CGY+KN  +  YV + +AKK+ S CGVP P C
Subjt:  MKKGFLMTGLCLLVVVAV-TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

KAG5527976.1 hypothetical protein RHGRI_028790 [Rhododendron griersonianum]3.5e-2156.25Show/hide
Query:  MKKGFLMTGLCLLVVVAV--TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        MKKG   + LC LVVV V    A+V  AVTCNP+EL PCL A+T   APS+ CCNK++E KPC CGY+KN  +  YV S +A+K+ S CGVP P C
Subjt:  MKKGFLMTGLCLLVVVAV--TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

TrEMBL top hitse value%identityAlignment
A0A0A0KW80 AAI domain-containing protein7.1e-2053.93Show/hide
Query:  TGLCLLVVVAV--TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        TGLCLLVVVA+  +  ++  AV+CNP EL PC+ A T S AP++ CC K+++ +PCYCGYLK+ KYK+Y +S   + I S C VPIP C
Subjt:  TGLCLLVVVAV--TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

A0A5A7VF50 Non-specific lipid-transfer protein 2-like7.1e-2050Show/hide
Query:  MKKGFLMTGLCL--------LVVVAVTGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIP
        MKK  + + LCL        +VV  +TGA++A AV CNP E+RPCL A   SV P++ CC K+KE +PC+C YLK+  +K Y++S +AKKI S CG+PIP
Subjt:  MKKGFLMTGLCL--------LVVVAVTGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIP

Query:  AC
         C
Subjt:  AC

A0A5D3BT00 Non-specific lipid-transfer protein 2-like5.4e-2054.55Show/hide
Query:  GLCLLVVVAV--TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        GLCLLVVVA+  TG ++  A +CNP EL PC+ A T S AP++ CC K+++ +PCYCGYLK+ KYK+Y +S   + I S C VPIP C
Subjt:  GLCLLVVVAV--TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

A0A6A4L177 AAI domain-containing protein (Fragment)2.1e-1954.17Show/hide
Query:  MKKGFLMTGLCLLVVVAV--TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        MKKG   + LC LVVV V    A+V  AVTCNP ELRPCL A+T    PS+ CC+KV+E KPC CGY+KN   K +V S + +K+ + CGVP P C
Subjt:  MKKGFLMTGLCLLVVVAV--TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

A0A6A4L2T0 AAI domain-containing protein (Fragment)1.2e-1954.17Show/hide
Query:  MKKGFLMTGLCLLVVVAV--TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        MKKG   + LC LVVV V    A+V  AVTCNP ELRPCL A+T    PS+ CC+KV+E KPC CGY+KN   K +V S + +K+ + CGVP P C
Subjt:  MKKGFLMTGLCLLVVVAV--TGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 22.4e-0932.56Show/hide
Query:  LCLLVVVAVTGAQV-AAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        L + +V A  G  V  A  +CN  +L  C  A      P++ CC+ ++  + C+C + K+ +Y  YV S +A+K +S CG+ +P C
Subjt:  LCLLVVVAVTGAQV-AAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

P82353 Non-specific lipid-transfer protein 21.7e-1548.53Show/hide
Query:  VTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        VTC+P +L PCL          +TCC K++E +PC CGYLKN   + YV S +A+K+ S+CGVP+P C
Subjt:  VTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

P86809 Non-specific lipid-transfer protein 22.5e-1453.12Show/hide
Query:  TCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPI
        TC+  +L PCL A T +  PS+ CCNK+KE KPC CGYLK+   K+YV S  A+K  S CGV +
Subjt:  TCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPI

Q10ST8 Non-specific lipid-transfer protein 25.4e-0932.56Show/hide
Query:  LCLLVVVAVTGAQV-AAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        L + +V A  G  V  A   CN  +L  C  A      P++ CC+ ++  + C+C + K+ +Y  YV S +A+K +S CG+ +P C
Subjt:  LCLLVVVAVTGAQV-AAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

Q43681 Probable non-specific lipid-transfer protein AKCS91.7e-1849.48Show/hide
Query:  MKKGFLMTGLCLLVVVA---VTGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        MK    M+ +C +VVVA   +    VA AVTCNP EL  C+ A T    PSSTCC+K+K  +PC C Y+KN   K YV S  AKK++S+CGV  P C
Subjt:  MKKGFLMTGLCLLVVVA---VTGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.4e-1538.3Show/hide
Query:  MKKGFLMTGLCLLVVVAVTGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        M K   ++ L L   + +    VA  VTC+P +L  C  A T S  PS  CC K++E +PC CGY++N   + YV S +A+K+ + C +P P+C
Subjt:  MKKGFLMTGLCLLVVVAVTGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.3e-1542.39Show/hide
Query:  KGFLMTGLCLLVVVAVTGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        K    T   LL+++     +VAA   CNP +L PCL        PS  CC+KVKE + C C YLKN  +KS++ S +AK I +DC  P P C
Subjt:  KGFLMTGLCLLVVVAVTGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.8e-1640.43Show/hide
Query:  MKKGFLMTGLCLLVVVAVTGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        M K  +++   L  V+ +  A  A AVTC+P +L PC  A T S  PS+ CC K+KE +PC CGY++N   + +V + +A+K+   C +PIP C
Subjt:  MKKGFLMTGLCLLVVVAVTGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.9e-1340.26Show/hide
Query:  VTGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        V G+     VTC+  +L  C+ A +    PS+ CC K+KEH+ C C Y++N  Y SYV S +A+K ++ C V  P C
Subjt:  VTGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein8.8e-1545.71Show/hide
Query:  AAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        A VTC+  +L  C       V PS+ CC K+KE +PC+C Y+K+ +Y  YV S++AKK ++ CGVP P C
Subjt:  AAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAGGTTTTTTGATGACAGGCCTTTGCCTTTTGGTGGTAGTGGCTGTCACCGGAGCTCAAGTTGCAGCGGCGGTGACATGCAACCCCAACGAGTTGAGACCTTG
TCTTTGGGCCTACACAATGTCGGTGGCACCATCATCAACTTGCTGCAACAAGGTGAAGGAGCACAAACCGTGCTACTGTGGATACCTCAAAAATCAAAAGTATAAGTCCT
ATGTACAGTCTTCTTCTGCCAAAAAAATCATTTCTGATTGTGGCGTTCCCATCCCCGCATGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAGGTTTTTTGATGACAGGCCTTTGCCTTTTGGTGGTAGTGGCTGTCACCGGAGCTCAAGTTGCAGCGGCGGTGACATGCAACCCCAACGAGTTGAGACCTTG
TCTTTGGGCCTACACAATGTCGGTGGCACCATCATCAACTTGCTGCAACAAGGTGAAGGAGCACAAACCGTGCTACTGTGGATACCTCAAAAATCAAAAGTATAAGTCCT
ATGTACAGTCTTCTTCTGCCAAAAAAATCATTTCTGATTGTGGCGTTCCCATCCCCGCATGTTAG
Protein sequenceShow/hide protein sequence
MKKGFLMTGLCLLVVVAVTGAQVAAAVTCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKPCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC