; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0022480 (gene) of Snake gourd v1 genome

Gene IDTan0022480
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG07:72330184..72331183
RNA-Seq ExpressionTan0022480
SyntenyTan0022480
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146384.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]2.9e-10967.31Show/hide
Query:  LKTTKKVVVTPSN-------RKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTW
        L+  +K +V  S          R+VWS NL EELELL EYLPEFP+V ID EFPGFL  TPKG+SE+EFY CLRFNVNRL+ILQ GLTL + KGNI MTW
Subjt:  LKTTKKVVVTPSN-------RKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTW

Query:  EFNFKDFDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVD
        EFNF+DFD +SDM  VSSLDSFLKNKGFDF KL+K GIA E FTTLFLPICRS QI RWITFHGFYDI YL+KLL IK +  SM  FATTAQ LLGT+ D
Subjt:  EFNFKDFDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVD

Query:  LKHMARYCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSP--LSKCSLL
        LKHMARYC+GLL+G+LGLKKLAKLLDVKR   AHFA SD+L T SVY KMK +FKLP EQCEGFLYGLP+ I   + V  I+DPS  T  P   SK S+L
Subjt:  LKHMARYCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSP--LSKCSLL

Query:  SCNRSSSVFVSL
        S   S+ + V +
Subjt:  SCNRSSSVFVSL

XP_022154798.1 probable CCR4-associated factor 1 homolog 6 [Momordica charantia]3.9e-11468.04Show/hide
Query:  MLKTTKKVVVTPS--NRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEF-----------------------------PGFLRYTPKGVSEKEFYECLRF
        M KT  K    P   ++ R+VWS+NLH+ELE+L EYLPEFPIVAIDTEF                             PGFLRYTPKGVSE+EFY+CLRF
Subjt:  MLKTTKKVVVTPS--NRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEF-----------------------------PGFLRYTPKGVSEKEFYECLRF

Query:  NVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLL
        NVNRL+ILQ GLTL N  GN+ MTWEFNF+DFD ISDM GVSSLDSFLKNKGFDF KL++DGIA E FTTLFLPICRS +I+RWITFHGFYDIAYL+KLL
Subjt:  NVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLL

Query:  GIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSP
         IK++  SM  FA TAQ LLGT+ DLKHM RYC+GLL+GDLGLKKLAKLLDVKR G AHFAGSDSLLTA+VY KMK MFK+P EQ EGFLYGLPHRI++ 
Subjt:  GIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSP

Query:  RRVVNIVDPSVATSSP
        + +V IVDPS  T  P
Subjt:  RRVVNIVDPSVATSSP

XP_022963784.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]2.4e-10368.99Show/hide
Query:  MLKTTKKVVVTPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD
        M K   +V +     KRDVWSHNL EE+EL+K+ L EFPIVAIDTEFPGFLR+TPKGVS++EFYECL+FNVNRLSILQ GLTL ND G IGMTWEFNF+D
Subjt:  MLKTTKKVVVTPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD

Query:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMAR
        FDKIS+M GV SLDSFLKNKGF+F  LR  GIAPE+F T F PI RS +I RWITFHG YDIAYLMK   I+ M TSM +FA TA  +LGT+ DLKHMA 
Subjt:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMAR

Query:  YCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSPLS
        Y   LL+G+LGLKKLAKLL V R+GTAHFAGSDSLLTASVY KMK++ K+ P   EGFLYGLP+ I+  RR V IVDPS  T   +S
Subjt:  YCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSPLS

XP_023511526.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]1.1e-10568.29Show/hide
Query:  MLKTTKKVVVTPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD
        M K  ++V +     KRDVWSHNL EE+EL+K+ L EFPIVAIDTEFPGFLR+TPKGVS++EFYECL+FNVNRLSILQ GLTL ND G IGMTWEFNF+D
Subjt:  MLKTTKKVVVTPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD

Query:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMAR
        FDKIS+M GV SLDSFLKNKGF+F  LR  GIAP++F   F PI RS +I RWITFHG YDIAYLMK   I+ M TSM MFA +A  +LGT+ DLKHMAR
Subjt:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMAR

Query:  YCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSPLS
        Y N LLNG+LGLK+LAKLL V R+GTAHFAGSDSLLTA+VY KMK++ K+ P++ EGFLYGLP+ I+  RR + IVDPS  T   +S
Subjt:  YCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSPLS

XP_023550519.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]3.1e-10370.96Show/hide
Query:  KRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDS
        KR+VWS+NL EE+EL+K YL EFPIVA+DTEFPGFLR+TPKGVS++EFY+CL+FNVNRLSILQ GLTLI++ G IGMTWEFNFKDFDKIS+M GV SLDS
Subjt:  KRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDS

Query:  FLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKL
        FLKNKGF+F KLR  GIAPE+F+  F P+ RSR+I RWITFHG YDIAYLMK   I  M TSM MFA  A  LLGT+ DLKHMARY + L NG+LGLKKL
Subjt:  FLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKL

Query:  AKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSPLS
        AKLL + R GTAHFAGSDSLLTASVY KMK + K+ P+  EGFLYGLP+ I+  RR V IVDPS  T   +S
Subjt:  AKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSPLS

TrEMBL top hitse value%identityAlignment
A0A6J1CXZ5 Poly(A)-specific ribonuclease1.4e-10967.31Show/hide
Query:  LKTTKKVVVTPSN-------RKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTW
        L+  +K +V  S          R+VWS NL EELELL EYLPEFP+V ID EFPGFL  TPKG+SE+EFY CLRFNVNRL+ILQ GLTL + KGNI MTW
Subjt:  LKTTKKVVVTPSN-------RKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTW

Query:  EFNFKDFDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVD
        EFNF+DFD +SDM  VSSLDSFLKNKGFDF KL+K GIA E FTTLFLPICRS QI RWITFHGFYDI YL+KLL IK +  SM  FATTAQ LLGT+ D
Subjt:  EFNFKDFDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVD

Query:  LKHMARYCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSP--LSKCSLL
        LKHMARYC+GLL+G+LGLKKLAKLLDVKR   AHFA SD+L T SVY KMK +FKLP EQCEGFLYGLP+ I   + V  I+DPS  T  P   SK S+L
Subjt:  LKHMARYCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSP--LSKCSLL

Query:  SCNRSSSVFVSL
        S   S+ + V +
Subjt:  SCNRSSSVFVSL

A0A6J1DLA5 Poly(A)-specific ribonuclease1.9e-11468.04Show/hide
Query:  MLKTTKKVVVTPS--NRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEF-----------------------------PGFLRYTPKGVSEKEFYECLRF
        M KT  K    P   ++ R+VWS+NLH+ELE+L EYLPEFPIVAIDTEF                             PGFLRYTPKGVSE+EFY+CLRF
Subjt:  MLKTTKKVVVTPS--NRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEF-----------------------------PGFLRYTPKGVSEKEFYECLRF

Query:  NVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLL
        NVNRL+ILQ GLTL N  GN+ MTWEFNF+DFD ISDM GVSSLDSFLKNKGFDF KL++DGIA E FTTLFLPICRS +I+RWITFHGFYDIAYL+KLL
Subjt:  NVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLL

Query:  GIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSP
         IK++  SM  FA TAQ LLGT+ DLKHM RYC+GLL+GDLGLKKLAKLLDVKR G AHFAGSDSLLTA+VY KMK MFK+P EQ EGFLYGLPHRI++ 
Subjt:  GIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSP

Query:  RRVVNIVDPSVATSSP
        + +V IVDPS  T  P
Subjt:  RRVVNIVDPSVATSSP

A0A6J1ESM7 Poly(A)-specific ribonuclease8.3e-10266.55Show/hide
Query:  MLKTTKKVVVTPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD
        M K  +   +     KR+VWSHNL EE+EL+K YL EFPIVAIDTEFPGFLR+TPKGVS++EFY+CL+FNVNRLSILQ GLTL +D G IGMTWEFNF+D
Subjt:  MLKTTKKVVVTPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD

Query:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMAR
        FD+IS+M GV SLDSFLKNKGF+F KLR  GIAP++F+  F P+ RS +I +WITFHG YDIAYLMK   I  M TSM MFA  A  LLGT+ DLKHMAR
Subjt:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMAR

Query:  YCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSPLS
        Y + L NG+LGLKKLAKLL + R GTAHFAGSDSLLTASVY KMK++ K+ P+  EGFLYGLP+ I+  R  V IVDPS  T   +S
Subjt:  YCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSPLS

A0A6J1HIZ7 Poly(A)-specific ribonuclease1.7e-10269.4Show/hide
Query:  KVVVTPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISD
        +V       +RDVWSHNL EE+EL+++ L EFPIVA+DTEFPGFLR+TPKGVS++EFYECL+FNVNRLSILQ GLTL ND G IGMTWEFNFKDFDKIS+
Subjt:  KVVVTPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISD

Query:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNGLL
        M GV SLDSFLKNKGF+F  LR  GIAPE+F   F PI RS +I RWITFHG YDIAYLMKL  I  M TSM +FA TA  LLGT+ DLKHMAR  N L 
Subjt:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNGLL

Query:  NGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSPLS
        NG+LGLKKLAKLL V R+GTAHFAGSDSLLTASVY KMK++ K+  +  EGFLYGLP+ I+  RR V IVDPS  T   +S
Subjt:  NGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSPLS

A0A6J1HL76 Poly(A)-specific ribonuclease1.2e-10368.99Show/hide
Query:  MLKTTKKVVVTPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD
        M K   +V +     KRDVWSHNL EE+EL+K+ L EFPIVAIDTEFPGFLR+TPKGVS++EFYECL+FNVNRLSILQ GLTL ND G IGMTWEFNF+D
Subjt:  MLKTTKKVVVTPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKD

Query:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMAR
        FDKIS+M GV SLDSFLKNKGF+F  LR  GIAPE+F T F PI RS +I RWITFHG YDIAYLMK   I+ M TSM +FA TA  +LGT+ DLKHMA 
Subjt:  FDKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMAR

Query:  YCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSPLS
        Y   LL+G+LGLKKLAKLL V R+GTAHFAGSDSLLTASVY KMK++ K+ P   EGFLYGLP+ I+  RR V IVDPS  T   +S
Subjt:  YCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSPLS

SwissProt top hitse value%identityAlignment
Q9LXM2 Probable CCR4-associated factor 1 homolog 92.5e-3937.08Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGF-----LRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNI---------GMTWEFNFKDFD
        R+VW+ NL  E EL+ E + ++P +++DTEFPG      LR+T    +  + Y  L+ NV+ LS++Q GLTL +  GN+         G  WEFNF+DFD
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGF-----LRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNI---------GMTWEFNFKDFD

Query:  KISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP---ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMV-DLKHM
           D     S++  L+ +G DF +  +DG+  E+F  L +    +C       W+TFH  YD  YLMK+L  + +  ++  F    + L G  V D+KHM
Subjt:  KISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP---ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMV-DLKHM

Query:  ARYCNGLLNGDLGLKKLAKLLDVKRS-GTAHFAGSDSLLTASVYVKMKMMFKLP--PEQCEGFLYGL
         ++C   L G  GL ++A+ L+V R+ G  H AGSDSLLT   + +M+ ++ +   PE+  G LYGL
Subjt:  ARYCNGLLNGDLGLKKLAKLLDVKRS-GTAHFAGSDSLLTASVYVKMKMMFKLP--PEQCEGFLYGL

Q9S9P2 Probable CCR4-associated factor 1 homolog 23.9e-4036.36Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYT--------PKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNI-------GMTWEFNFKDF
        R+VW+HNL +E+ L+++ + +FP VA+DTEFPG +  T        P  +  +  Y+ L+ NVN L ++Q GLTL ++KGN+          W+FNF++F
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYT--------PKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNI-------GMTWEFNFKDF

Query:  DKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFL--PICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMA
        + ISDM  + S++  L+    D  K  + G+  ++F  L +   +  + +I  W+TFH  YD  YL+KLL  K +   +  F    ++    + D+K++ 
Subjt:  DKISDMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFL--PICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMA

Query:  RYCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMK-MMFKLPPEQCEGFLYGL
         +C  L     GL+K+A+LL VKR G +H AGSDSLLT   ++KMK   F     +  GFL+GL
Subjt:  RYCNGLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMK-MMFKLPPEQCEGFLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.1e-4239.38Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD
        R+VW+ NL EE++L+++ + +FP VA+DTEFPG +   P G  +      YE L+ NVN L ++Q GLT  N++GN+          W+FNF++FD  SD
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD

Query:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNG
        +  + S++  LK  G D  K   DGI  ++F  L +   I  +  +  W+TFH  YD  YL+KLL  + +  S   F         T+ D+KH+ ++CN 
Subjt:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNG

Query:  LLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL
        L     GL KLA+LL+V+R G  H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  LLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL

Q9SHJ0 Probable CCR4-associated factor 1 homolog 12.3e-4038.4Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSF
        R VW  N+ EE+  + E L  FP++A DTE+PG +  T    S  E Y  ++ NV    ++Q G TL N KG IG  WE NF +F   SD     S++ F
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSF

Query:  LKNKGFDFVKLRKDGIAPEKFTTLFLP----ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGL
        L+  G D  K+R +G+  + F   F P    + RS++   ++TF G YD AY + +L    +  +   FAT   ++ G + D K MA +C G L   LGL
Subjt:  LKNKGFDFVKLRKDGIAPEKFTTLFLP----ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGL

Query:  KKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGL
         KLA+LL + R G AH AGSDSL+TA V++K+K +++       G +YG+
Subjt:  KKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGL

Q9SKZ2 Probable CCR4-associated factor 1 homolog 71.0e-4038.46Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKG---VSEKEFYECLRFNVNRLSILQFGLTLINDKGNIG--------MTWEFNFKDFDKIS
        R+VW+ NL  E+ L++E + +FP VA+DTEFPG +   P G    + +  YE L+ NVN L ++Q GLT  ++KGN+           W+FNF++FD  S
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKG---VSEKEFYECLRFNVNRLSILQFGLTLINDKGNIG--------MTWEFNFKDFDKIS

Query:  DMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCN
        D+    S++  L+  G DFVK  + GI  ++F  L +   I  +  +  W+TFH  YD  YL+KLL  + +  +   F          + D+KH+ ++CN
Subjt:  DMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCN

Query:  GLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKL-PPEQCEGFLYGL
         L     GL KLA+LLDV+R G  H AGSDSLLT+  + K++  F +   E+  G LYGL
Subjt:  GLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKL-PPEQCEGFLYGL

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-4138.4Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSF
        R VW  N+ EE+  + E L  FP++A DTE+PG +  T    S  E Y  ++ NV    ++Q G TL N KG IG  WE NF +F   SD     S++ F
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGVSSLDSF

Query:  LKNKGFDFVKLRKDGIAPEKFTTLFLP----ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGL
        L+  G D  K+R +G+  + F   F P    + RS++   ++TF G YD AY + +L    +  +   FAT   ++ G + D K MA +C G L   LGL
Subjt:  LKNKGFDFVKLRKDGIAPEKFTTLFLP----ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGL

Query:  KKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGL
         KLA+LL + R G AH AGSDSL+TA V++K+K +++       G +YG+
Subjt:  KKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGL

AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.8e-4439.38Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD
        R+VW+ NL EE++L+++ + +FP VA+DTEFPG +   P G  +      YE L+ NVN L ++Q GLT  N++GN+          W+FNF++FD  SD
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD

Query:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNG
        +  + S++  LK  G D  K   DGI  ++F  L +   I  +  +  W+TFH  YD  YL+KLL  + +  S   F         T+ D+KH+ ++CN 
Subjt:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNG

Query:  LLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL
        L     GL KLA+LL+V+R G  H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  LLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.8e-4439.38Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD
        R+VW+ NL EE++L+++ + +FP VA+DTEFPG +   P G  +      YE L+ NVN L ++Q GLT  N++GN+          W+FNF++FD  SD
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD

Query:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNG
        +  + S++  LK  G D  K   DGI  ++F  L +   I  +  +  W+TFH  YD  YL+KLL  + +  S   F         T+ D+KH+ ++CN 
Subjt:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNG

Query:  LLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL
        L     GL KLA+LL+V+R G  H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  LLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.8e-4439.38Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD
        R+VW+ NL EE++L+++ + +FP VA+DTEFPG +   P G  +      YE L+ NVN L ++Q GLT  N++GN+          W+FNF++FD  SD
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKE---FYECLRFNVNRLSILQFGLTLINDKGNIG-------MTWEFNFKDFDKISD

Query:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNG
        +  + S++  LK  G D  K   DGI  ++F  L +   I  +  +  W+TFH  YD  YL+KLL  + +  S   F         T+ D+KH+ ++CN 
Subjt:  MVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNG

Query:  LLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL
        L     GL KLA+LL+V+R G  H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  LLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKLPP-EQCEGFLYGL

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.3e-4238.46Show/hide
Query:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKG---VSEKEFYECLRFNVNRLSILQFGLTLINDKGNIG--------MTWEFNFKDFDKIS
        R+VW+ NL  E+ L++E + +FP VA+DTEFPG +   P G    + +  YE L+ NVN L ++Q GLT  ++KGN+           W+FNF++FD  S
Subjt:  RDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKG---VSEKEFYECLRFNVNRLSILQFGLTLINDKGNIG--------MTWEFNFKDFDKIS

Query:  DMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCN
        D+    S++  L+  G DFVK  + GI  ++F  L +   I  +  +  W+TFH  YD  YL+KLL  + +  +   F          + D+KH+ ++CN
Subjt:  DMVGVSSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLP--ICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCN

Query:  GLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKL-PPEQCEGFLYGL
         L     GL KLA+LLDV+R G  H AGSDSLLT+  + K++  F +   E+  G LYGL
Subjt:  GLLNGDLGLKKLAKLLDVKRSGTAHFAGSDSLLTASVYVKMKMMFKL-PPEQCEGFLYGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAGACCACCAAAAAAGTTGTGGTCACTCCAAGTAATAGAAAACGAGACGTTTGGTCCCACAACCTCCATGAAGAATTAGAACTTTTGAAAGAGTATCTTCCAGA
GTTTCCGATAGTCGCCATTGATACAGAATTTCCAGGATTTTTGCGATACACTCCAAAGGGTGTTTCTGAGAAAGAATTTTATGAGTGTCTTCGATTCAATGTGAATCGAT
TAAGTATACTCCAATTTGGTCTCACACTCATCAATGACAAGGGAAACATCGGAATGACTTGGGAGTTTAACTTCAAAGATTTCGATAAAATTTCTGACATGGTAGGAGTT
TCTTCGCTCGATTCGTTTCTCAAAAACAAGGGATTCGATTTTGTCAAATTAAGAAAAGATGGAATCGCGCCAGAGAAGTTCACCACCTTGTTTCTTCCAATCTGTCGCAG
CCGCCAAATCGATAGATGGATCACCTTCCATGGATTTTACGACATTGCTTATCTTATGAAGCTTCTAGGAATCAAATTCATGGCGACCTCCATGGAGATGTTTGCAACCA
CCGCTCAGCAATTGTTGGGAACCATGGTCGATCTCAAACACATGGCTCGCTACTGCAATGGCTTGCTTAATGGCGACTTGGGGCTAAAAAAACTAGCCAAATTGCTTGAC
GTCAAACGAAGCGGTACAGCCCATTTTGCTGGTTCTGATAGTTTACTCACAGCTTCTGTTTATGTGAAGATGAAGATGATGTTCAAGCTCCCTCCAGAGCAATGTGAAGG
ATTTTTGTACGGATTGCCTCACCGAATTCGATCCCCTCGACGAGTTGTGAACATTGTTGATCCATCTGTAGCGACTTCATCACCATTGTCGAAATGTTCGTTGTTGTCTT
GTAATAGATCGTCGTCAGTGTTCGTTTCGCTAGTTGAGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAGACCACCAAAAAAGTTGTGGTCACTCCAAGTAATAGAAAACGAGACGTTTGGTCCCACAACCTCCATGAAGAATTAGAACTTTTGAAAGAGTATCTTCCAGA
GTTTCCGATAGTCGCCATTGATACAGAATTTCCAGGATTTTTGCGATACACTCCAAAGGGTGTTTCTGAGAAAGAATTTTATGAGTGTCTTCGATTCAATGTGAATCGAT
TAAGTATACTCCAATTTGGTCTCACACTCATCAATGACAAGGGAAACATCGGAATGACTTGGGAGTTTAACTTCAAAGATTTCGATAAAATTTCTGACATGGTAGGAGTT
TCTTCGCTCGATTCGTTTCTCAAAAACAAGGGATTCGATTTTGTCAAATTAAGAAAAGATGGAATCGCGCCAGAGAAGTTCACCACCTTGTTTCTTCCAATCTGTCGCAG
CCGCCAAATCGATAGATGGATCACCTTCCATGGATTTTACGACATTGCTTATCTTATGAAGCTTCTAGGAATCAAATTCATGGCGACCTCCATGGAGATGTTTGCAACCA
CCGCTCAGCAATTGTTGGGAACCATGGTCGATCTCAAACACATGGCTCGCTACTGCAATGGCTTGCTTAATGGCGACTTGGGGCTAAAAAAACTAGCCAAATTGCTTGAC
GTCAAACGAAGCGGTACAGCCCATTTTGCTGGTTCTGATAGTTTACTCACAGCTTCTGTTTATGTGAAGATGAAGATGATGTTCAAGCTCCCTCCAGAGCAATGTGAAGG
ATTTTTGTACGGATTGCCTCACCGAATTCGATCCCCTCGACGAGTTGTGAACATTGTTGATCCATCTGTAGCGACTTCATCACCATTGTCGAAATGTTCGTTGTTGTCTT
GTAATAGATCGTCGTCAGTGTTCGTTTCGCTAGTTGAGACTTGA
Protein sequenceShow/hide protein sequence
MLKTTKKVVVTPSNRKRDVWSHNLHEELELLKEYLPEFPIVAIDTEFPGFLRYTPKGVSEKEFYECLRFNVNRLSILQFGLTLINDKGNIGMTWEFNFKDFDKISDMVGV
SSLDSFLKNKGFDFVKLRKDGIAPEKFTTLFLPICRSRQIDRWITFHGFYDIAYLMKLLGIKFMATSMEMFATTAQQLLGTMVDLKHMARYCNGLLNGDLGLKKLAKLLD
VKRSGTAHFAGSDSLLTASVYVKMKMMFKLPPEQCEGFLYGLPHRIRSPRRVVNIVDPSVATSSPLSKCSLLSCNRSSSVFVSLVET