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Tan0022489 (gene) of Snake gourd v1 genome

Gene IDTan0022489
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING-type domain-containing protein
Genome locationLG09:70672576..70673110
RNA-Seq ExpressionTan0022489
SyntenyTan0022489
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2633720.1 hypothetical protein D8674_029967 [Pyrus ussuriensis x Pyrus communis]2.8e-1146.15Show/hide
Query:  DDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITP
        DDD +HT   D LF           F   E  +   P  AS AV+ES LPSV+LT++D    NA      C+VC + +K GE+AKQLPC H YHG CI P
Subjt:  DDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITP

Query:  WLWI
        WL I
Subjt:  WLWI

KAG6735355.1 hypothetical protein POTOM_062076 [Populus tomentosa]3.7e-1135.38Show/hide
Query:  DRFERRFIQSQQNHEIPYSFQPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVC
        D  E + + +  N +  ++ +P++ + DD ++T   + LF              E E++ +    A+ +V+E  LPSV+ T++D  SNNA      C+VC
Subjt:  DRFERRFIQSQQNHEIPYSFQPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVC

Query:  MNAIKVGEEAKQLPCHHWYHGPCITPWLWI
         + I VGE  KQLPC H YHG CI PWL I
Subjt:  MNAIKVGEEAKQLPCHHWYHGPCITPWLWI

TQD85614.1 hypothetical protein C1H46_028788 [Malus baccata]2.8e-1139.23Show/hide
Query:  DRFERRFIQSQQNHEIPYSFQPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVC
        D  E   + +    EI     P+   DDD +HT   D LF              E E++      A+ AV+ES LPSV+LT++D    NA      C+VC
Subjt:  DRFERRFIQSQQNHEIPYSFQPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVC

Query:  MNAIKVGEEAKQLPCHHWYHGPCITPWLWI
         + +K GE+AKQLPC H YHG CI PWL I
Subjt:  MNAIKVGEEAKQLPCHHWYHGPCITPWLWI

XP_008393264.2 uncharacterized protein LOC103455455 [Malus domestica]2.8e-1139.23Show/hide
Query:  DRFERRFIQSQQNHEIPYSFQPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVC
        D  E   + +    EI     P+   DDD +HT   D LF              E E++      A+ AV+ES LPSV+LT++D    NA      C+VC
Subjt:  DRFERRFIQSQQNHEIPYSFQPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVC

Query:  MNAIKVGEEAKQLPCHHWYHGPCITPWLWI
         + +K GE+AKQLPC H YHG CI PWL I
Subjt:  MNAIKVGEEAKQLPCHHWYHGPCITPWLWI

XP_009337814.1 PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Pyrus x bretschneideri]2.2e-1139.23Show/hide
Query:  DRFERRFIQSQQNHEIPYSFQPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVC
        D  E   + +    EI     P+   DDD +HT   D LF              E E++      A+ AV+ES LPSV+LT++D    NA      C+VC
Subjt:  DRFERRFIQSQQNHEIPYSFQPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVC

Query:  MNAIKVGEEAKQLPCHHWYHGPCITPWLWI
         + +K GE+AKQLPC H YHG CI PWL I
Subjt:  MNAIKVGEEAKQLPCHHWYHGPCITPWLWI

TrEMBL top hitse value%identityAlignment
A0A2K1XI43 RING-type domain-containing protein1.8e-1135.38Show/hide
Query:  DRFERRFIQSQQNHEIPYSFQPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVC
        D  E + + +  N +  ++ +P++ + DD ++T   + LF              E E++ +    A+ +V+E  LPSV+ T++D  SNNA      C+VC
Subjt:  DRFERRFIQSQQNHEIPYSFQPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVC

Query:  MNAIKVGEEAKQLPCHHWYHGPCITPWLWI
         + I VGE  KQLPC H YHG CI PWL I
Subjt:  MNAIKVGEEAKQLPCHHWYHGPCITPWLWI

A0A498JSG0 Uncharacterized protein2.3e-1144.23Show/hide
Query:  DDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITP
        DDD +HT   D LF              E E++      A+ AV+ES LPSV+LT++D    NA      C+VC + +K GE+AKQLPC H YHG CI P
Subjt:  DDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITP

Query:  WLWI
        WL I
Subjt:  WLWI

A0A5C7H3K6 RING-type domain-containing protein1.8e-1142.73Show/hide
Query:  QPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYH
        +PF    DD  HT   D LF              E E++ +    AS +V+E+ LP V LT++D  SNNA      C+VC + I +GE+AKQLPC H YH
Subjt:  QPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYH

Query:  GPCITPWLWI
        G CI PWL I
Subjt:  GPCITPWLWI

A0A7J0GN03 RING/U-box superfamily protein2.3e-1152.27Show/hide
Query:  GLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWLWI
        G  G  YL  D +E +   EP  AS  VLE+ LPSVILT++D  ++NA      C+VC + I VGE+AKQLPC H YHG CI PWL I
Subjt:  GLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWLWI

B9RLH2 Zinc finger protein, putative4.0e-1141.82Show/hide
Query:  QPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYH
        +P+    DD ++T   + LF              E E+S +    A+ +V+E  LPSV+LT++D  SNNA      C+VC + I VGE+AKQLPC H YH
Subjt:  QPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYH

Query:  GPCITPWLWI
        G CI PWL I
Subjt:  GPCITPWLWI

SwissProt top hitse value%identityAlignment
Q6DIP3 E3 ubiquitin-protein ligase RNF1265.7e-0732.58Show/hide
Query:  FANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL
        +A G  G D +   L  +  +  P  A T  +++ LP++ +TE+         +   C VC     VGE  +QLPC+H +H  CI PWL
Subjt:  FANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL

Q6GPV5 E3 ubiquitin-protein ligase RNF1811.3e-0643.94Show/hide
Query:  PLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL
        P  AS  V+ES LP V +T +       A AA  C VC+   + GE  +QLPC H +H  CI PWL
Subjt:  PLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL

Q6IRP0 E3 ubiquitin-protein ligase RNF126-B1.7e-0632.58Show/hide
Query:  FANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL
        +A G  G D +   L  +  +  P  A T  +++ LP++ +TE+             C VC     VGE  +QLPC+H +H  CI PWL
Subjt:  FANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL

Q94AK4 E3 ubiquitin-protein ligase RZF19.8e-0732.61Show/hide
Query:  DFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL
        D+ F    PG + L   L        P  A  + +++ LP++ +T++   S+++      C VC +  ++  EAKQ+PCHH YH  CI PWL
Subjt:  DFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL

Q9M2S6 E3 ubiquitin-protein ligase SDIR17.5e-0731.19Show/hide
Query:  FQPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWY
        ++     D D++ T        N LP + Y   D E   S  +  S S++  E +L S       N S         CSVC+  + VGE  + LPC H +
Subjt:  FQPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWY

Query:  HGPCITPWL
        H  CI PWL
Subjt:  HGPCITPWL

Arabidopsis top hitse value%identityAlignment
AT2G44330.1 RING/U-box superfamily protein1.8e-0833.77Show/hide
Query:  FDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL
        F+ +EE   L+P+ +        LP++ ++    +S ++  +A  C++C     VGE A++LPC+H YH  CI PWL
Subjt:  FDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL

AT3G55530.1 RING/U-box superfamily protein5.3e-0831.19Show/hide
Query:  FQPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWY
        ++     D D++ T        N LP + Y   D E   S  +  S S++  E +L S       N S         CSVC+  + VGE  + LPC H +
Subjt:  FQPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWY

Query:  HGPCITPWL
        H  CI PWL
Subjt:  HGPCITPWL

AT3G56580.1 RING/U-box superfamily protein7.0e-0832.61Show/hide
Query:  DFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL
        D+ F    PG + L   L        P  A  + +++ LP++ +T++   S+++      C VC +  ++  EAKQ+PCHH YH  CI PWL
Subjt:  DFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL

AT3G56580.2 RING/U-box superfamily protein7.0e-0832.61Show/hide
Query:  DFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL
        D+ F    PG + L   L        P  A  + +++ LP++ +T++   S+++      C VC +  ++  EAKQ+PCHH YH  CI PWL
Subjt:  DFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL

AT3G56580.3 RING/U-box superfamily protein7.0e-0832.61Show/hide
Query:  DFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL
        D+ F    PG + L   L        P  A  + +++ LP++ +T++   S+++      C VC +  ++  EAKQ+PCHH YH  CI PWL
Subjt:  DFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGEEAKQLPCHHWYHGPCITPWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCGATTTGAACGACGATTCATTCAGTCTCAACAGAATCACGAGATTCCATATTCGTTTCAACCATTTGCAATTACTGACGACGATGATCTCCACACTGTGTG
GTGCGATTTTTTGTTCGCAAACGGATTGCCAGGCTACGATTACCTAAACTTCGATCTAGAAGAAGAACACTCCGATTTAGAGCCATTATCTGCATCAACCGCTGTTCTTG
AGAGCCTTCTTCCGTCGGTGATTTTGACAGAACAAGATAATAATAGTAATAATGCTGCTGCTGCTGCATTTTTCTGTTCTGTTTGTATGAATGCGATTAAAGTAGGGGAA
GAAGCGAAGCAATTGCCATGCCACCATTGGTATCATGGTCCCTGCATTACTCCATGGTTGTGGATTCTCTCTGCGCTCAACCAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATCGATTTGAACGACGATTCATTCAGTCTCAACAGAATCACGAGATTCCATATTCGTTTCAACCATTTGCAATTACTGACGACGATGATCTCCACACTGTGTG
GTGCGATTTTTTGTTCGCAAACGGATTGCCAGGCTACGATTACCTAAACTTCGATCTAGAAGAAGAACACTCCGATTTAGAGCCATTATCTGCATCAACCGCTGTTCTTG
AGAGCCTTCTTCCGTCGGTGATTTTGACAGAACAAGATAATAATAGTAATAATGCTGCTGCTGCTGCATTTTTCTGTTCTGTTTGTATGAATGCGATTAAAGTAGGGGAA
GAAGCGAAGCAATTGCCATGCCACCATTGGTATCATGGTCCCTGCATTACTCCATGGTTGTGGATTCTCTCTGCGCTCAACCAAAATTAA
Protein sequenceShow/hide protein sequence
MDDRFERRFIQSQQNHEIPYSFQPFAITDDDDLHTVWCDFLFANGLPGYDYLNFDLEEEHSDLEPLSASTAVLESLLPSVILTEQDNNSNNAAAAAFFCSVCMNAIKVGE
EAKQLPCHHWYHGPCITPWLWILSALNQN