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Tan0022498 (gene) of Snake gourd v1 genome

Gene IDTan0022498
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransport membrane protein
Genome locationLG08:70849963..70851138
RNA-Seq ExpressionTan0022498
SyntenyTan0022498
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEN56110.1 transport membrane protein [Cucumis melo subsp. melo]1.6e-0490.91Show/hide
Query:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
        MLTVRISFILSVCSQVPVIVIRLPELRGLS+ +
Subjt:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
KAA0059749.1 transport membrane protein [Cucumis melo var. makuwa]1.6e-0490.91Show/hide
Query:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
        MLTVRISFILSVCSQVPVIVIRLPELRGLS+ +
Subjt:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
YP_004849338.1 transport membrane protein, partial [Cucumis sativus]1.6e-0490.91Show/hide
Query:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
        MLTVRISFILSVCSQVPVIVIRLPELRGLS+ +
Subjt:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
YP_009913637.1 transport membrane protein [Luffa acutangula]1.6e-0490.91Show/hide
Query:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
        MLTVRISFILSVCSQVPVIVIRLPELRGLS+ +
Subjt:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
TrEMBL top hitse value%identityAlignment
A0A0A0KDR6 Uncharacterized protein5.7e-0847.22Show/hide
Query:  SPPKVGEWKLNVDVAWSRPIIGGIKFIPRPLPVKVLEAQAVVVGLEQIALHWEGMNPPIVVEFDSLEWVSSS
        SPPK G WKLNV   W  P     KF  +   + +L+A A+V GL  I L W G+NPP  VEFD+LE    S
Subjt:  SPPKVGEWKLNVDVAWSRPIIGGIKFIPRPLPVKVLEAQAVVVGLEQIALHWEGMNPPIVVEFDSLEWVSSS
A0A5A7V1T2 Transport membrane protein (Mitochondrion)7.7e-0590.91Show/hide
Query:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
        MLTVRISFILSVCSQVPVIVIRLPELRGLS+ +
Subjt:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
A0A7D6C8B1 Transport membrane protein7.7e-0590.91Show/hide
Query:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
        MLTVRISFILSVCSQVPVIVIRLPELRGLS+ +
Subjt:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
G3EIZ0 Transport membrane protein (Fragment)7.7e-0590.91Show/hide
Query:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
        MLTVRISFILSVCSQVPVIVIRLPELRGLS+ +
Subjt:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
G3EU26 Transport membrane protein7.7e-0590.91Show/hide
Query:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
        MLTVRISFILSVCSQVPVIVIRLPELRGLS+ +
Subjt:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
SwissProt top hitse value%identityAlignment
P93312 Uncharacterized tatC-like protein ymf163.7e-0481.82Show/hide
Query:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
        MLTVRISFI SVCSQVPVIVI L E RGLSL +
Subjt:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
Arabidopsis top hitse value%identityAlignment
ATMG00570.1 Sec-independent periplasmic protein translocase2.3e-0684.85Show/hide
Query:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS
        MLTVRISFI SVCSQVPVIVI LPE RGLSL +
Subjt:  MLTVRISFILSVCSQVPVIVIRLPELRGLSLSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAACTGTTCGTATTTCGTTCATTCTATCGGTATGCTCCCAGGTACCTGTAATTGTGATCCGTTTGCCAGAACTAAGAGGTCTTTCTCTTTCATCGGAGATACTCCT
CGATCTGCATTGGGATATAAGACGACCGGGTGACAGGAGTTCGTGTGAGGCCTCCATAACTCCAAAGAAGGGGTGGTCGCCGCCTAAAGTTGGTGAGTGGAAGCTGAATG
TGGATGTAGCTTGGTCTCGCCCCATTATTGGCGGGATAAAGTTCATTCCTCGCCCTTTGCCCGTGAAAGTGCTAGAAGCCCAAGCGGTCGTTGTTGGCCTTGAACAGATC
GCTCTTCATTGGGAAGGTATGAACCCTCCAATTGTGGTTGAGTTCGACTCGCTTGAATGGGTATCTTCATCGAGGAAGCCTGATATGAAAACCCTAGCGAATTGGAATTA
G
mRNA sequenceShow/hide mRNA sequence
ATGTTAACTGTTCGTATTTCGTTCATTCTATCGGTATGCTCCCAGGTACCTGTAATTGTGATCCGTTTGCCAGAACTAAGAGGTCTTTCTCTTTCATCGGAGATACTCCT
CGATCTGCATTGGGATATAAGACGACCGGGTGACAGGAGTTCGTGTGAGGCCTCCATAACTCCAAAGAAGGGGTGGTCGCCGCCTAAAGTTGGTGAGTGGAAGCTGAATG
TGGATGTAGCTTGGTCTCGCCCCATTATTGGCGGGATAAAGTTCATTCCTCGCCCTTTGCCCGTGAAAGTGCTAGAAGCCCAAGCGGTCGTTGTTGGCCTTGAACAGATC
GCTCTTCATTGGGAAGGTATGAACCCTCCAATTGTGGTTGAGTTCGACTCGCTTGAATGGGTATCTTCATCGAGGAAGCCTGATATGAAAACCCTAGCGAATTGGAATTA
G
Protein sequenceShow/hide protein sequence
MLTVRISFILSVCSQVPVIVIRLPELRGLSLSSEILLDLHWDIRRPGDRSSCEASITPKKGWSPPKVGEWKLNVDVAWSRPIIGGIKFIPRPLPVKVLEAQAVVVGLEQI
ALHWEGMNPPIVVEFDSLEWVSSSRKPDMKTLANWN