; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0022501 (gene) of Snake gourd v1 genome

Gene IDTan0022501
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionE3 ubiquitin-protein ligase RNF4-like
Genome locationLG07:72333947..72340260
RNA-Seq ExpressionTan0022501
SyntenyTan0022501
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144388.1 E3 ubiquitin-protein ligase RNF4 [Cucumis sativus]1.8e-9490.34Show/hide
Query:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT
        MSTQAMRGHT RGYHRRKSLDLDLNSMPPTENRDQGETSQL  Q+AQVNQQQ VQPAMIDIEAIDDDVIESSA AFAEAKNKSRRNARKN+VDVDAEER+
Subjt:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT

Query:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF
        R+SNN RSKRRR+V  + +VNSD LLINLEASNSSMK KPAPPKEPKFSCPICMGPLVEETSTRCGHIFCK+CIRAAI VQSKCPTCRKRVTAKELIRVF
Subjt:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF

Query:  LPGTSLE
        LPGTSLE
Subjt:  LPGTSLE

XP_022963653.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata]1.0e-9490.82Show/hide
Query:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT
        MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQ  F EAQVNQQQSVQPAMIDIEAIDDDVIESSA AFAEAKNKSRRNARKNIVDVDAEER+
Subjt:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT

Query:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF
        R SNN RSKRRR+VP Q+ VNSD LLINLE SNSSMK K APPKEP FSCPICMGPLVEETSTRCGHIFCK+CI+ AIAVQSKCPTCRKRVTAKELIRVF
Subjt:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF

Query:  LPGTSLE
        LPGTSLE
Subjt:  LPGTSLE

XP_022967334.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima]2.1e-9591.3Show/hide
Query:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT
        MST+AMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQ  FQEAQVNQQQSVQPAMIDIEAIDDDVIESSA AFAEAKNKSRRNARKNIVDVDAEER+
Subjt:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT

Query:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF
        R SNN RSKRRR+VP Q+ VNSD LLINLEASNSSMK K APPKEP FSCPICMGPLVEETSTRCGHIFCK+CI+ AIAVQSKCPTCRKRVTAKELIRVF
Subjt:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF

Query:  LPGTSLE
        LPGTSLE
Subjt:  LPGTSLE

XP_023554040.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita pepo subsp. pepo]2.3e-9490.34Show/hide
Query:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT
        MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRD GETSQ  FQEAQVNQQQSVQPAMIDIEAIDDDVIESSA AFAEAKNKSRRNARKNIVDVDAEER+
Subjt:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT

Query:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF
        R SNN RSKRRR+VP Q+ VNSD LLINLE SNSSMK K +PPKEP FSCPICMGPLVEETSTRCGHIFCK+CI+ AIAVQSKCPTCRKRVTAKELIRVF
Subjt:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF

Query:  LPGTSLE
        LPGTSLE
Subjt:  LPGTSLE

XP_038888129.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida]7.3e-9692.27Show/hide
Query:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT
        MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQL FQEAQVNQQQ VQPAMIDIEAIDDDVIESSA AFAEAKNKSRRNARKNIVDVDAEE T
Subjt:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT

Query:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF
        ++SNN RSKRRR+V  Q+ VNSD LLINLEASNSSMK KPAPPKEPKFSCPICMGPLVEETSTRCGHIFCK+CIRAAIAVQ+KCPTCRKRVTAKELIRVF
Subjt:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF

Query:  LPGTSLE
        LPGTSLE
Subjt:  LPGTSLE

TrEMBL top hitse value%identityAlignment
A0A1S3CBW2 E3 ubiquitin-protein ligase RNF4-like isoform X25.2e-9288.89Show/hide
Query:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT
        MSTQAMRGH  RGYHRRKSLDLDLNSMPPTENRDQGETSQL  Q+AQVNQQQ VQPAMIDIEAIDDDVIESSA AFAEAKNKSRRNARKN+VDVDA ER+
Subjt:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT

Query:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF
        R+SNN RSKRRR+V  + +VNSD LLINLEASNSSMK KPAPPKEPKFSCPICMGPLVEETST+CGHIFCK+CIRAAI VQSKCPTCRKRVTAKELIRVF
Subjt:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF

Query:  LPGTSLE
        LPGTSLE
Subjt:  LPGTSLE

A0A1S3CCB4 E3 ubiquitin-protein ligase RNF4-like isoform X17.3e-9489.37Show/hide
Query:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT
        MSTQAMRGH  RGYHRRKSLDLDLNSMPPTENRDQGETSQL  Q+AQVNQQQ VQPAMIDIEAIDDDVIESSA AFAEAKNKSRRNARKN+VDVDAEER+
Subjt:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT

Query:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF
        R+SNN RSKRRR+V  + +VNSD LLINLEASNSSMK KPAPPKEPKFSCPICMGPLVEETST+CGHIFCK+CIRAAI VQSKCPTCRKRVTAKELIRVF
Subjt:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF

Query:  LPGTSLE
        LPGTSLE
Subjt:  LPGTSLE

A0A6J1E010 E3 ubiquitin-protein ligase RNF4 isoform X21.1e-9288.89Show/hide
Query:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT
        MSTQAMRG TARGYHRRKSLDLDLNSMPP+ENRDQGE SQL  QEA  NQQQ +QP MIDIEAIDDDVIESSA AFAEAKNKSRRNARKNIVDVDAEER+
Subjt:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT

Query:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF
        R+SNNIRSKRRREV  QR VNS+ LLINLEASNSS+K KP PPKEPKFSCPICMGPLVEETSTRCGHIFCK+CI+AAIAVQSKCPTCRKRVTAKELIRVF
Subjt:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF

Query:  LPGTSLE
        LPGTSLE
Subjt:  LPGTSLE

A0A6J1HFU4 E3 ubiquitin-protein ligase RNF4-like5.1e-9590.82Show/hide
Query:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT
        MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQ  F EAQVNQQQSVQPAMIDIEAIDDDVIESSA AFAEAKNKSRRNARKNIVDVDAEER+
Subjt:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT

Query:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF
        R SNN RSKRRR+VP Q+ VNSD LLINLE SNSSMK K APPKEP FSCPICMGPLVEETSTRCGHIFCK+CI+ AIAVQSKCPTCRKRVTAKELIRVF
Subjt:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF

Query:  LPGTSLE
        LPGTSLE
Subjt:  LPGTSLE

A0A6J1HQI7 E3 ubiquitin-protein ligase RNF4-like1.0e-9591.3Show/hide
Query:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT
        MST+AMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQ  FQEAQVNQQQSVQPAMIDIEAIDDDVIESSA AFAEAKNKSRRNARKNIVDVDAEER+
Subjt:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERT

Query:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF
        R SNN RSKRRR+VP Q+ VNSD LLINLEASNSSMK K APPKEP FSCPICMGPLVEETSTRCGHIFCK+CI+ AIAVQSKCPTCRKRVTAKELIRVF
Subjt:  RISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVF

Query:  LPGTSLE
        LPGTSLE
Subjt:  LPGTSLE

SwissProt top hitse value%identityAlignment
B5DF45 TNF receptor-associated factor 63.6e-0551.11Show/hide
Query:  PPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIA-VQSKCP
        PP E K+ CPIC+  L E   T CGH FCK+CI  +I     KCP
Subjt:  PPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIA-VQSKCP

E7FDW2 E3 ubiquitin-protein ligase PDZRN3-B2.1e-0538.18Show/hide
Query:  EPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRV
        +P F C +C   L +  +T CGH+FC  C+   +  QS CP   +R++ KEL  V
Subjt:  EPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRV

Q32NQ8 RING finger protein 102.7e-0541.94Show/hide
Query:  SCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQ----SKCPTCRKRVTAKELIRVFLPGTSL
        SCPIC+ P V    TRCGHIFC  CI   +++     S+CP C   +  K+L  V    T L
Subjt:  SCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQ----SKCPTCRKRVTAKELIRVFLPGTSL

Q3MV19 TNF receptor-associated factor 6-A3.6e-0542.86Show/hide
Query:  PPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIA-VQSKCPTCRKRVTAKEL
        PP E K+ CPIC+  L E   T CGH FCK+CI  ++     KCP   + +  K+L
Subjt:  PPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIA-VQSKCPTCRKRVTAKEL

Q9CQ29 RING finger protein 1512.7e-0845.76Show/hide
Query:  APPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRV
        A P + KF C +C G L   T   C HIFCK CI   +A Q+ CP CRK VT ++++ V
Subjt:  APPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRV

Arabidopsis top hitse value%identityAlignment
AT3G07200.1 RING/U-box superfamily protein3.0e-3148.6Show/hide
Query:  TENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAI--DDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERTRISNNIRSKRRREVPFQRNVNSDLLLI
        T+N  QG+  Q V  +A    Q    P  I++ AI  DDDV+ES+A AFA+AKNKS R+AR+    VD E     +   RS RRR         SD   +
Subjt:  TENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAI--DDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERTRISNNIRSKRRREVPFQRNVNSDLLLI

Query:  NLEASNSSMKNKP-APP-KEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVFLPGT
        +    N   K+K  APP +EPKFSCPIC+ P  +E ST+CGHIFCK CI+ A+++Q+KCPTCRK++T K+LIRVFLP T
Subjt:  NLEASNSSMKNKP-APP-KEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVFLPGT

AT3G07200.2 RING/U-box superfamily protein3.0e-3148.6Show/hide
Query:  TENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAI--DDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERTRISNNIRSKRRREVPFQRNVNSDLLLI
        T+N  QG+  Q V  +A    Q    P  I++ AI  DDDV+ES+A AFA+AKNKS R+AR+    VD E     +   RS RRR         SD   +
Subjt:  TENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAI--DDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERTRISNNIRSKRRREVPFQRNVNSDLLLI

Query:  NLEASNSSMKNKP-APP-KEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVFLPGT
        +    N   K+K  APP +EPKFSCPIC+ P  +E ST+CGHIFCK CI+ A+++Q+KCPTCRK++T K+LIRVFLP T
Subjt:  NLEASNSSMKNKP-APP-KEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVFLPGT

AT5G48655.1 RING/U-box superfamily protein5.4e-4151.43Show/hide
Query:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKN--IVDVDAEE
        M+T  +R    RG  RRK++ +DLN++P     DQ  TS  V             P MID++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++  
Subjt:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKN--IVDVDAEE

Query:  RTRISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNK---PA-PPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAK
         TR   NI +KRRR    +  ++ +   +N E + SS  ++   PA PP+EPKF+CPICM P  EE ST+CGHIFCK CI+ AI+ Q KCPTCRK+VTAK
Subjt:  RTRISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNK---PA-PPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAK

Query:  ELIRVFLPGT
        ELIRVFLP T
Subjt:  ELIRVFLPGT

AT5G48655.2 RING/U-box superfamily protein5.4e-4151.43Show/hide
Query:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKN--IVDVDAEE
        M+T  +R    RG  RRK++ +DLN++P     DQ  TS  V             P MID++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++  
Subjt:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKN--IVDVDAEE

Query:  RTRISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNK---PA-PPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAK
         TR   NI +KRRR    +  ++ +   +N E + SS  ++   PA PP+EPKF+CPICM P  EE ST+CGHIFCK CI+ AI+ Q KCPTCRK+VTAK
Subjt:  RTRISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNK---PA-PPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAK

Query:  ELIRVFLPGT
        ELIRVFLP T
Subjt:  ELIRVFLPGT

AT5G48655.3 RING/U-box superfamily protein5.4e-4151.43Show/hide
Query:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKN--IVDVDAEE
        M+T  +R    RG  RRK++ +DLN++P     DQ  TS  V             P MID++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++  
Subjt:  MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKN--IVDVDAEE

Query:  RTRISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNK---PA-PPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAK
         TR   NI +KRRR    +  ++ +   +N E + SS  ++   PA PP+EPKF+CPICM P  EE ST+CGHIFCK CI+ AI+ Q KCPTCRK+VTAK
Subjt:  RTRISNNIRSKRRREVPFQRNVNSDLLLINLEASNSSMKNK---PA-PPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAK

Query:  ELIRVFLPGT
        ELIRVFLP T
Subjt:  ELIRVFLPGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACTCAGGCAATGAGGGGACATACCGCAAGAGGTTATCATCGTAGGAAATCATTGGACTTGGACCTAAACAGCATGCCACCAACTGAGAACCGAGATCAAGGGGA
GACATCTCAATTGGTGTTTCAGGAAGCACAAGTTAATCAACAACAGTCCGTACAACCTGCAATGATTGATATTGAGGCCATTGATGATGATGTTATAGAATCATCCGCCA
TAGCTTTTGCTGAAGCTAAAAATAAATCCAGACGGAATGCTAGGAAGAATATAGTTGATGTGGATGCAGAAGAGCGAACCAGGATTTCAAATAATATCCGGAGCAAGCGT
AGGAGAGAAGTGCCCTTCCAACGAAATGTAAATTCTGATTTATTATTAATCAATTTGGAAGCCAGCAACAGCTCTATGAAAAATAAGCCTGCTCCACCGAAGGAGCCCAA
ATTCAGTTGTCCAATATGCATGGGCCCGTTAGTAGAGGAAACATCAACAAGGTGTGGTCATATTTTCTGCAAGTCATGCATCAGGGCTGCAATAGCTGTCCAGAGTAAAT
GCCCAACCTGCAGGAAGAGAGTAACTGCCAAAGAACTCATTAGAGTATTCCTTCCTGGGACAAGCTTGGAGTAG
mRNA sequenceShow/hide mRNA sequence
AAATTGTGGAAATGGAGGATAGGCTGCGTAAAGTAAAAACCGAGTCGGTGACGTAGGCACGTGCGAAGGAAGAAAACACGTGTCAGACCATAATTGGTTTTGAGAAGAAG
ACGTGGCGTGTTTCAGGGTCGGCTCTTTCTCCCTCGCAGAGCCCCCTCAGTCTCGCAAGAACCCTGGGAAGTTCCCCATTTTCGTCCCCAATCCCTAACCCTTCTCTCCA
CTATCCCTTTATAATGGCCGTTTCCCCTTCTTTTTCCCTTCCATATCTCAACCCTTAGAACTCCAACTCGAAATTTCACAAACCCTAAAACTAATCATCCACTCCGAAAC
TCATCTATCCAATCTAATCCCTCGCTTTATATCTTCATCAACCGCTTATTTGAGGCTGTTGAGGAGCTCCAAAATAGATGAGTACTCAGGCAATGAGGGGACATACCGCA
AGAGGTTATCATCGTAGGAAATCATTGGACTTGGACCTAAACAGCATGCCACCAACTGAGAACCGAGATCAAGGGGAGACATCTCAATTGGTGTTTCAGGAAGCACAAGT
TAATCAACAACAGTCCGTACAACCTGCAATGATTGATATTGAGGCCATTGATGATGATGTTATAGAATCATCCGCCATAGCTTTTGCTGAAGCTAAAAATAAATCCAGAC
GGAATGCTAGGAAGAATATAGTTGATGTGGATGCAGAAGAGCGAACCAGGATTTCAAATAATATCCGGAGCAAGCGTAGGAGAGAAGTGCCCTTCCAACGAAATGTAAAT
TCTGATTTATTATTAATCAATTTGGAAGCCAGCAACAGCTCTATGAAAAATAAGCCTGCTCCACCGAAGGAGCCCAAATTCAGTTGTCCAATATGCATGGGCCCGTTAGT
AGAGGAAACATCAACAAGGTGTGGTCATATTTTCTGCAAGTCATGCATCAGGGCTGCAATAGCTGTCCAGAGTAAATGCCCAACCTGCAGGAAGAGAGTAACTGCCAAAG
AACTCATTAGAGTATTCCTTCCTGGGACAAGCTTGGAGTAGGCTTTATATGATTCTGTTTTTTGAAGACTTCGAAGGGAAATGGTCGAAGCTCTCTGTAAGTAAGAAAAG
CTAATTTTTAGGGGGAAATTTCCAGTGCATTCTGCAGATGGCTGCTGCGGCTTGATGATCTCAGAGTTGCAATAGGAGGAGGTAGCAGGAAATTTGGATTTCCATATTTT
TTTTGTTGTTACTTTTGGTGGTTTTCTGGAGTTGTAAACGAACTGACATCGAAATCCAATAGTAATGCAATGAGATTACATAATTAAATCCAGAAAGTTGGTTTTGTTTG
TTGACTTCAGGTTGTCTATGTATGTTATTTATATAAATTAATATATCTGATGTAATGATCATGTTATATATTTGCATCTGTTCGAGAGCCTTGTTG
Protein sequenceShow/hide protein sequence
MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLVFQEAQVNQQQSVQPAMIDIEAIDDDVIESSAIAFAEAKNKSRRNARKNIVDVDAEERTRISNNIRSKR
RREVPFQRNVNSDLLLINLEASNSSMKNKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIAVQSKCPTCRKRVTAKELIRVFLPGTSLE