; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0022571 (gene) of Snake gourd v1 genome

Gene IDTan0022571
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG10:56891961..56895897
RNA-Seq ExpressionTan0022571
SyntenyTan0022571
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607551.1 Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-15395.19Show/hide
Query:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPA-APKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV
        MASLAASTAAASLG+SEMLRNPLSFSGASARSA S SSPV SK VALFGKKPA  PKPK S VSP +DELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPA-APKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

KAG7037190.1 Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-15495.19Show/hide
Query:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKP-AAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV
        MASLAASTAAASLG+SEMLRNPLSFSGASARSA S SSPV SK VA+FGKKP AAPKPK S VSP +DELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKP-AAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_022932496.1 chlorophyll a-b binding protein CP26, chloroplastic-like [Cucurbita moschata]4.8e-15495.53Show/hide
Query:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPA-APKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV
        MASLAASTAAASLG+SEMLRNPLSFSGASARSA S SSPV SK VALFGKKPA APKPK S VSP +DELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPA-APKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_022973438.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucurbita maxima]4.8e-15494.85Show/hide
Query:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKP-AAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV
        MASLAASTAAASLG+SEMLRNPLS SGASARSA S SSPV SK VA+FGKKP AAPKPK S VSP++DELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKP-AAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV+AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_038889943.1 chlorophyll a-b binding protein CP26, chloroplastic [Benincasa hispida]3.0e-15696.22Show/hide
Query:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAP-KPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV
        MASLAASTAAASLG+SEMLRNPLSFSGASARSAPS SSP   KTVALFGKKPAAP KPK S VSP++DELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAP-KPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

TrEMBL top hitse value%identityAlignment
A0A0A0KXR5 Chlorophyll a-b binding protein, chloroplastic4.4e-15394.16Show/hide
Query:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAP-KPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV
        MASLAASTAAASLG+SEMLRNPLSF   S+RSAPSPS+P   KTVALFGKKPAAP KPK S  SP++DELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAP-KPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A1S3CBI9 Chlorophyll a-b binding protein, chloroplastic3.1e-15193.81Show/hide
Query:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAP-KPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV
        MASLAASTAAASLG+SEMLRNPLSFS  SA   PS SSP   KTVALFGKKPAAP KPK +  SP++DELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAP-KPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1DTI7 Chlorophyll a-b binding protein, chloroplastic3.7e-15293.45Show/hide
Query:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP
        MASLAASTAAASLG+SEMLRNPLSF G S RSAPS SS V  KTVALFGKKPAA    ++ VSP++DELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVP
Subjt:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP

Query:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
        GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
Subjt:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI

Query:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGN ERVPTL
Subjt:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1EWI5 Chlorophyll a-b binding protein, chloroplastic2.3e-15495.53Show/hide
Query:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPA-APKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV
        MASLAASTAAASLG+SEMLRNPLSFSGASARSA S SSPV SK VALFGKKPA APKPK S VSP +DELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPA-APKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1ID20 Chlorophyll a-b binding protein, chloroplastic2.3e-15494.85Show/hide
Query:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKP-AAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV
        MASLAASTAAASLG+SEMLRNPLS SGASARSA S SSPV SK VA+FGKKP AAPKPK S VSP++DELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKP-AAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV+AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

SwissProt top hitse value%identityAlignment
P12330 Chlorophyll a-b binding protein 1, chloroplastic1.1e-5750.74Show/hide
Query:  AAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPF
        AAA++ +S         S   AR+APS SS +  +      K  A PKP AS  SP       WYG DR ++L  G L   E P YL GE PGDYG+D  
Subjt:  AAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPF

Query:  GLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLN
        GLS  PE F+K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I    I+A+ A +VVL+G  E YRI  G  
Subjt:  GLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLN

Query:  FE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
         E  D L+PGG FDPLGLADDP+  A LKVKEIKNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P15193 Chlorophyll a-b binding protein type 2 member 1A, chloroplastic6.3e-5653.36Show/hide
Query:  KASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVW
        K SV + ID   + WYGPDR ++L        E P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G + PE   + G   G EAVW
Subjt:  KASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVW

Query:  FKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQ
        FK GA +     L+Y G+   I    I+A+ A +V+L+G  E YR+  G   E  D ++PGG FDPLGLADDPD  A LKVKEIKNGRLAMF+M GF+ Q
Subjt:  FKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQ

Query:  AYVTGEGPVENLAKHLSDPFGNN
        A VTG+GP+ENLA HL+DP  NN
Subjt:  AYVTGEGPVENLAKHLSDPFGNN

P27497 Chlorophyll a-b binding protein M9, chloroplastic3.1e-5548.24Show/hide
Query:  SGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFEL
        S   A S+ + +    +   +LFG+     +  A+   P     + WYGPDR ++L  G L   E P YL GE PGDYG+D  GLS  PE F+K +  E+
Subjt:  SGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFEL

Query:  IHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLG
        IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I    I+A+ A +VVL+G  E YR+  G   E  D L+PGG FDPLG
Subjt:  IHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLG

Query:  LADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        LADDP+  A +KVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  LADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P27517 Chlorophyll a-b binding protein of LHCII type I, chloroplastic7.4e-5754.03Show/hide
Query:  KWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL
        ++YGPDR  FL  G    ++ PEYL GE PGDYG+D  GLS  P+ F++Y+  ELIHARWA+LGA G + PE  +++      E VWFK GA +     L
Subjt:  KWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL

Query:  NYFGNNIPI---NLIVAVIAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVEN
        NY GN   I   ++I  +  +VVL+G AE YR   G    L+  D L+PGGPFDPLGLADDPD  A LKVKEIKNGRLAMF+ LGF+ QA VTG+GPV+N
Subjt:  NYFGNNIPI---NLIVAVIAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVEN

Query:  LAKHLSDPFGN
        L  HL+DP  N
Subjt:  LAKHLSDPFGN

Q9XF89 Chlorophyll a-b binding protein CP26, chloroplastic4.8e-13382.86Show/hide
Query:  ASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGL
        ASLG+SEML  PL+F   S  SAP  SSP   KTVALF KK  AP  K+  VS   DELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEV GDYGYDPFGL
Subjt:  ASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGL

Query:  SKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDKL
         KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV+AEVVL+GGAEYYRI NGL+FEDKL
Subjt:  SKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDKL

Query:  HPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        HPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  HPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 36.0e-5445.72Show/hide
Query:  LGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSK
        +  S M  +  +F+G +   +P+ S  + S  V +   +    KPK    SP       WYG DR  +L        E P YL GE PGDYG+D  GLS 
Subjt:  LGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSK

Query:  KPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NF
         PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YR+  NG     
Subjt:  KPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NF

Query:  EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT1G29920.1 chlorophyll A/B-binding protein 26.0e-5445.72Show/hide
Query:  LGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSK
        +  S M  +  +F+G +   +P+ S  + S  V +   +    KPK    SP       WYG DR  +L        E P YL GE PGDYG+D  GLS 
Subjt:  LGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSK

Query:  KPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NF
         PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YR+  NG     
Subjt:  KPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NF

Query:  EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT1G29930.1 chlorophyll A/B binding protein 13.5e-5445.72Show/hide
Query:  LGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSK
        +  S M  +  +F+G + + +P+ S  + S  V +   +    KPK    SP       WYG DR  +L        E P YL GE PGDYG+D  GLS 
Subjt:  LGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSK

Query:  KPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NF
         PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YR+  NG     
Subjt:  KPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NF

Query:  EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  EDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT3G27690.1 photosystem II light harvesting complex gene 2.38.7e-5353.81Show/hide
Query:  WYGPDRRIFLPEGLLDRSE-IPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL
        WYGPDR    P+ L   SE  P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G   PE  +K G   G EAVWFK G+ +     L
Subjt:  WYGPDRRIFLPEGLLDRSE-IPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL

Query:  NYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLA
        +Y GN   I    I+A+ A +VVL+G  E YRI  G   E  D L+PGG FDPL LA+DP+  + LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENL 
Subjt:  NYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLA

Query:  KHLSDPFGNN
         H++DP  NN
Subjt:  KHLSDPFGNN

AT4G10340.1 light harvesting complex of photosystem II 53.4e-13482.86Show/hide
Query:  ASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGL
        ASLG+SEML  PL+F   S  SAP  SSP   KTVALF KK  AP  K+  VS   DELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEV GDYGYDPFGL
Subjt:  ASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGL

Query:  SKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDKL
         KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV+AEVVL+GGAEYYRI NGL+FEDKL
Subjt:  SKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDKL

Query:  HPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        HPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  HPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTGGCAGCCTCCACCGCCGCCGCCTCCCTCGGCATCTCCGAAATGCTCAGAAATCCCCTCAGCTTCTCCGGTGCCTCTGCTCGGTCCGCTCCGTCCCCTTC
TAGCCCGGTGGCCTCCAAGACCGTTGCGCTTTTCGGGAAGAAGCCAGCCGCCCCCAAGCCGAAGGCCTCCGTCGTCTCTCCGATCGACGACGAGCTCGCCAAGTGGTATG
GTCCTGACAGAAGGATTTTCTTGCCCGAGGGGCTGTTGGACCGATCCGAGATCCCCGAGTACTTGAACGGAGAAGTCCCCGGAGACTACGGTTACGACCCGTTTGGATTG
AGCAAGAAACCAGAAGACTTCAGCAAATACCAAGCATTTGAGTTGATTCATGCACGATGGGCGATGCTTGGAGCTGCTGGTTTCATTATCCCTGAGGCGTTCAACAAATT
CGGTGCCAACTGCGGGCCTGAGGCTGTGTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCCATCAACCTCATTGTCG
CCGTCATTGCTGAGGTTGTTCTTGTTGGTGGTGCAGAATATTACAGAATCATCAACGGCTTGAACTTTGAGGACAAGCTTCACCCAGGAGGTCCATTCGACCCGTTGGGG
CTCGCGGACGACCCGGACCAGGCAGCAATCTTGAAAGTGAAGGAGATCAAGAATGGAAGATTGGCCATGTTTGCAATGCTAGGGTTTTACTTCCAGGCTTACGTGACAGG
AGAAGGGCCAGTGGAGAACTTGGCCAAGCATTTGAGTGATCCTTTTGGAAACAACTTGCTCACAGTCATTTCTGGAAATGCTGAAAGAGTTCCAACTCTTTAA
mRNA sequenceShow/hide mRNA sequence
CACCATTTTTGCATTCTTTCCTTCTTCACTCTCAGCTTCTCCGGCCATGGCTTCCTTGGCAGCCTCCACCGCCGCCGCCTCCCTCGGCATCTCCGAAATGCTCAGAAATC
CCCTCAGCTTCTCCGGTGCCTCTGCTCGGTCCGCTCCGTCCCCTTCTAGCCCGGTGGCCTCCAAGACCGTTGCGCTTTTCGGGAAGAAGCCAGCCGCCCCCAAGCCGAAG
GCCTCCGTCGTCTCTCCGATCGACGACGAGCTCGCCAAGTGGTATGGTCCTGACAGAAGGATTTTCTTGCCCGAGGGGCTGTTGGACCGATCCGAGATCCCCGAGTACTT
GAACGGAGAAGTCCCCGGAGACTACGGTTACGACCCGTTTGGATTGAGCAAGAAACCAGAAGACTTCAGCAAATACCAAGCATTTGAGTTGATTCATGCACGATGGGCGA
TGCTTGGAGCTGCTGGTTTCATTATCCCTGAGGCGTTCAACAAATTCGGTGCCAACTGCGGGCCTGAGGCTGTGTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAAC
ACATTGAATTACTTTGGAAACAACATTCCCATCAACCTCATTGTCGCCGTCATTGCTGAGGTTGTTCTTGTTGGTGGTGCAGAATATTACAGAATCATCAACGGCTTGAA
CTTTGAGGACAAGCTTCACCCAGGAGGTCCATTCGACCCGTTGGGGCTCGCGGACGACCCGGACCAGGCAGCAATCTTGAAAGTGAAGGAGATCAAGAATGGAAGATTGG
CCATGTTTGCAATGCTAGGGTTTTACTTCCAGGCTTACGTGACAGGAGAAGGGCCAGTGGAGAACTTGGCCAAGCATTTGAGTGATCCTTTTGGAAACAACTTGCTCACA
GTCATTTCTGGAAATGCTGAAAGAGTTCCAACTCTTTAAAATGAAGAATTGCATTTTATAATTAAAGCCGCAAGTTTGTGTATTGAATGAAAATCTTGAATGCGTTTGTA
AATTTTTATGGAGACTATTTGTAGCCCCTCACCACTCACCACTCTCGTGCATTTGAAAGAGATATGAACAAGAGTTAAGACCAAATTTTCTATCAACTTGTGTGTGTAAA
ATGTAGCTCACAAATCACAGCTTGAATTGGGATGGTAGGACCAATATCTAATATAACTCGAGTTGAATTTTCATTCAAACCTAATCTAACCCATATATTTATTTGAGTTG
GGTCATCTATTGGATTGAGTTGAAGGGTACTTGTACTCAATTTAAGCTTTTGGATCGGTGGCCGTATGTCCGATCTAATATAACCCAACTCGAATTTTCG
Protein sequenceShow/hide protein sequence
MASLAASTAAASLGISEMLRNPLSFSGASARSAPSPSSPVASKTVALFGKKPAAPKPKASVVSPIDDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGL
SKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLG
LADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL