; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0022613 (gene) of Snake gourd v1 genome

Gene IDTan0022613
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUPF0161 protein At3g09310
Genome locationLG03:65853998..65854817
RNA-Seq ExpressionTan0022613
SyntenyTan0022613
Gene Ontology termsNA
InterPro domainsIPR002696 - Putative membrane protein insertion efficiency factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027339.1 UPF0161 protein [Cucurbita argyrosperma subsp. argyrosperma]1.1e-6988.16Show/hide
Query:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC     Q PIFF G C Q H SAA FSIRFNG+ LRRPLI SETRA SNSSAN DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

XP_004142065.1 UPF0161 protein At3g09310 isoform X1 [Cucumis sativus]1.2e-7189.47Show/hide
Query:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC    N  PIFF GRCHQ  CSAA FSIRFN R LRR LI SETRA SNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

XP_008448003.1 PREDICTED: UPF0161 protein At3g09310 [Cucumis melo]2.7e-7188.82Show/hide
Query:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC  P N  PIFFTGRCHQ    AA FSIRFN R LRRPLI SETRA S SSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGT+LTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

XP_022931846.1 UPF0161 protein At3g09310 [Cucurbita moschata]9.1e-7288.82Show/hide
Query:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC    NQ PIFF G C +SH SAA FSIRFNG+ LRRPLI SETRA SNSSAN DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

XP_023518310.1 UPF0161 protein At3g09310 [Cucurbita pepo subsp. pepo]5.9e-7188.16Show/hide
Query:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC    NQ PIFF GRCHQS  SAA FSIRFNG+ LRRPLI SE+RA SNSSAN DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNP G SGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

TrEMBL top hitse value%identityAlignment
A0A0A0KXI4 Uncharacterized protein5.8e-7289.47Show/hide
Query:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC    N  PIFF GRCHQ  CSAA FSIRFN R LRR LI SETRA SNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

A0A1S3BJN3 UPF0161 protein At3g093101.3e-7188.82Show/hide
Query:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC  P N  PIFFTGRCHQ    AA FSIRFN R LRRPLI SETRA S SSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGT+LTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

A0A5A7STY4 UPF0161 protein1.2e-6985.44Show/hide
Query:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC  P N  PIFFTGRCHQ    AA FSIRFN R LRRPLI SETRA S SSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPL------GGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGT+LTAWRLCRCNPL      GGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPL------GGSGFDPPRWFDEESLPEPED

A0A6J1EUS1 UPF0161 protein At3g093104.4e-7288.82Show/hide
Query:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC    NQ PIFF G C +SH SAA FSIRFNG+ LRRPLI SETRA SNSSAN DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

A0A6J1HNH0 UPF0161 protein At3g093107.1e-7087.5Show/hide
Query:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC     Q PIFF G C Q+H SAA FSIRFNG+ LRRPLI SETRA SNSSAN DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRY+PT
Subjt:  MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED

SwissProt top hitse value%identityAlignment
B0K8I2 Putative membrane protein insertion efficiency factor9.7e-1653.33Show/hide
Query:  MLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP
        ++K Y+R ISP+ P SCR+ PTCS+YS++A  KYG+ KG I++ WR+ RCNP    G+DP
Subjt:  MLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP

B0T0Z8 Putative membrane protein insertion efficiency factor1.1e-1661.67Show/hide
Query:  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPP
        LK YK  +SP +   CRYLPTCSEY+ QA K +G  KG+ L   R+CRCNPLGGSG+DPP
Subjt:  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPP

Q11SD8 Putative membrane protein insertion efficiency factor9.7e-1661.02Show/hide
Query:  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP
        +K Y+  ISPLLP +CRY PTCSEY +QA +KYG  KG  L   R+C CNP GGSG+DP
Subjt:  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP

Q2S3T2 Putative membrane protein insertion efficiency factor3.5e-1852.17Show/hide
Query:  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE
        + +++ Y+  +SP L  +CR+ PTCS Y++QA+++YG  KG +LT  RL RC+P GG G+DPPRWFDEE
Subjt:  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE

Q9SR32 UPF0161 protein At3g093102.6e-3763.11Show/hide
Query:  RFNGRTLRRPLIPSET----RAISNSSA------NSDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRL
        +FN   LR   +P  T    R +S  S        S QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+AYKKYGV KGT+LT WRL
Subjt:  RFNGRTLRRPLIPSET----RAISNSSA------NSDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRL

Query:  CRCNPLGGSGFDPPRWFDEESL
        CRCNPLGGSGFDPPRWF E  +
Subjt:  CRCNPLGGSGFDPPRWFDEESL

Arabidopsis top hitse value%identityAlignment
AT3G09310.1 unknown protein1.9e-3863.11Show/hide
Query:  RFNGRTLRRPLIPSET----RAISNSSA------NSDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRL
        +FN   LR   +P  T    R +S  S        S QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+AYKKYGV KGT+LT WRL
Subjt:  RFNGRTLRRPLIPSET----RAISNSSA------NSDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRL

Query:  CRCNPLGGSGFDPPRWFDEESL
        CRCNPLGGSGFDPPRWF E  +
Subjt:  CRCNPLGGSGFDPPRWFDEESL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCTTCCCACCACAAACTGCCGAGGACCCCCAAACCAGATTCCAATCTTCTTCACCGGCCGCTGCCATCAAAGTCACTGCTCTGCCGCCGTCTTCAGTATTCG
ATTTAATGGCCGAACGCTCCGTCGGCCGTTAATCCCAAGCGAAACGCGCGCCATATCTAATTCAAGCGCGAACAGCGACCAAGATGGCGAAGTGGACAATCTGGGGGTTA
AAGCTGCATTATCAATGCTCAAATTCTACAAACGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTGCCTACATGTAGTGAGTATTCCATGCAAGCGTACAAG
AAATATGGTGTTGCGAAGGGTACTATCTTGACTGCTTGGCGTCTCTGTCGCTGCAATCCCCTTGGTGGGTCTGGGTTTGATCCTCCCCGGTGGTTTGATGAAGAAAGCTT
GCCAGAACCAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTCTTCCCACCACAAACTGCCGAGGACCCCCAAACCAGATTCCAATCTTCTTCACCGGCCGCTGCCATCAAAGTCACTGCTCTGCCGCCGTCTTCAGTATTCG
ATTTAATGGCCGAACGCTCCGTCGGCCGTTAATCCCAAGCGAAACGCGCGCCATATCTAATTCAAGCGCGAACAGCGACCAAGATGGCGAAGTGGACAATCTGGGGGTTA
AAGCTGCATTATCAATGCTCAAATTCTACAAACGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTGCCTACATGTAGTGAGTATTCCATGCAAGCGTACAAG
AAATATGGTGTTGCGAAGGGTACTATCTTGACTGCTTGGCGTCTCTGTCGCTGCAATCCCCTTGGTGGGTCTGGGTTTGATCCTCCCCGGTGGTTTGATGAAGAAAGCTT
GCCAGAACCAGAAGATTGA
Protein sequenceShow/hide protein sequence
MAVLPTTNCRGPPNQIPIFFTGRCHQSHCSAAVFSIRFNGRTLRRPLIPSETRAISNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYK
KYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEESLPEPED