; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0022619 (gene) of Snake gourd v1 genome

Gene IDTan0022619
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionB3 domain-containing protein
Genome locationLG02:88402937..88403389
RNA-Seq ExpressionTan0022619
SyntenyTan0022619
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146365.1 putative B3 domain-containing protein At2g27410 [Momordica charantia]8.0e-4464.24Show/hide
Query:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRF-DFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITH
        MR+RI EIGGY I+LVIQKQL +T++NKNH RLS+P KKLR  DFVTEEE KLLNQ   NN  NKKG++V IIDP L+E  ICLKKWKIGS DLYCL+T 
Subjt:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRF-DFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITH

Query:  WNSFVQQNSLKSGDVVQLWSFRKDGVDVANETE--ISHHLCFAMAKPDISN
        WNSFV++ +L+SGD +QLWSFRKD  D A ETE   +  L  AM K ++ +
Subjt:  WNSFVQQNSLKSGDVVQLWSFRKDGVDVANETE--ISHHLCFAMAKPDISN

XP_022959448.1 putative B3 domain-containing protein At3g24850 [Cucurbita moschata]6.1e-4462.76Show/hide
Query:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW
        MR+RI E+G Y+I+L IQKQL DT++NKNH RLS P KKL+ DF TEEE ++L Q++    K KKG+NVMI+DP+LRES ICLK WKIGS D YCL+T W
Subjt:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW

Query:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPD
        NS V+QN  KSGD VQLWSFRKD ++   +T +S  LCFAM K D
Subjt:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPD

XP_022990807.1 B3 domain-containing protein At2g32645-like [Cucurbita maxima]6.7e-4362.07Show/hide
Query:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW
        MR+RI E+G Y+I+L IQKQL DT++NKNH RLS P KKL+ DF TEEE ++L Q++      KKG+NVMI+DP+LRES ICLK WKIGS D YCL+T W
Subjt:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW

Query:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPD
        NS V+QN  KSGD VQLWSFRKD  +   +T +S  LCFAM K D
Subjt:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPD

XP_023540870.1 putative B3 domain-containing protein At3g24850 [Cucurbita pepo subsp. pepo]4.7e-4463.45Show/hide
Query:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW
        MR+RI E+G Y+IEL IQKQL DT++NKNH RLS P KKL+ DF TEEE ++L Q++    K KKG+NVMI+DP+LRES ICLK WKIGS D YCL+T W
Subjt:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW

Query:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPD
        NS V+QN  KSGD VQLWSFRKD  +   +T +S  LCFAM K D
Subjt:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPD

XP_023540987.1 putative B3 domain-containing protein At3g24850 [Cucurbita pepo subsp. pepo]4.7e-4463.45Show/hide
Query:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW
        MR+RI E+G Y+IEL IQKQL DT++NKNH RLS P KKL+ DF TEEE ++L Q++    K KKG+NVMI+DP+LRES ICLK WKIGS D YCL+T W
Subjt:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW

Query:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPD
        NS V+QN  KSGD VQLWSFRKD  +   +T +S  LCFAM K D
Subjt:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPD

TrEMBL top hitse value%identityAlignment
A0A6J1CSV9 B3 domain-containing protein At2g31420-like3.6e-4259.18Show/hide
Query:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW
        +R+RIAE+GGY+I++VIQK+L DT+LN+NH RLS+PIKKL  DF TEEE +LL+Q+D  ++ NK G+  +I+DP LRES I LKKWKIGS ++YCL++ W
Subjt:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW

Query:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPDIS
        NS  Q+NSL+SGD +QLWSFRK      N    + HLCFA+ K DIS
Subjt:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPDIS

A0A6J1CX35 putative B3 domain-containing protein At2g274103.9e-4464.24Show/hide
Query:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRF-DFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITH
        MR+RI EIGGY I+LVIQKQL +T++NKNH RLS+P KKLR  DFVTEEE KLLNQ   NN  NKKG++V IIDP L+E  ICLKKWKIGS DLYCL+T 
Subjt:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRF-DFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITH

Query:  WNSFVQQNSLKSGDVVQLWSFRKDGVDVANETE--ISHHLCFAMAKPDISN
        WNSFV++ +L+SGD +QLWSFRKD  D A ETE   +  L  AM K ++ +
Subjt:  WNSFVQQNSLKSGDVVQLWSFRKDGVDVANETE--ISHHLCFAMAKPDISN

A0A6J1GM07 putative B3 domain-containing protein At3g248502.1e-4261.38Show/hide
Query:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW
        MR+RI E+G Y+I+L IQKQL DT++NKNH RLS P KKL+ DF TEEE ++L Q++      KKG+NVMI+DP+LRES ICLK WKIGS D YCL+T W
Subjt:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW

Query:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPD
        N  V+QN  KSGD VQLWSFRKD  +   +T +S  LCFAM K D
Subjt:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPD

A0A6J1H5Z0 putative B3 domain-containing protein At3g248503.0e-4462.76Show/hide
Query:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW
        MR+RI E+G Y+I+L IQKQL DT++NKNH RLS P KKL+ DF TEEE ++L Q++    K KKG+NVMI+DP+LRES ICLK WKIGS D YCL+T W
Subjt:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW

Query:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPD
        NS V+QN  KSGD VQLWSFRKD ++   +T +S  LCFAM K D
Subjt:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPD

A0A6J1JKC5 B3 domain-containing protein At2g32645-like3.3e-4362.07Show/hide
Query:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW
        MR+RI E+G Y+I+L IQKQL DT++NKNH RLS P KKL+ DF TEEE ++L Q++      KKG+NVMI+DP+LRES ICLK WKIGS D YCL+T W
Subjt:  MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHW

Query:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPD
        NS V+QN  KSGD VQLWSFRKD  +   +T +S  LCFAM K D
Subjt:  NSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPD

SwissProt top hitse value%identityAlignment
Q5RM09 B3 domain-containing protein At1g059201.4e-1129.66Show/hide
Query:  GGYEIELVIQKQLHDTNLNKNHERLSVPIKK-LRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKI----GSSD-LYCLITHWNS
        G  + +L+I+K L   +++    RLS+PI   ++ DF+T +E++L+++ ++ N+ N  G+   ++D   ++  +  K+W +    GSS   + L   W++
Subjt:  GGYEIELVIQKQLHDTNLNKNHERLSVPIKK-LRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKI----GSSD-LYCLITHWNS

Query:  FVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPDIS
         V+ N LK GD + LWSFR + +           LCFA+  P  S
Subjt:  FVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPDIS

Q9FLV7 B3 domain-containing protein At5g240504.0e-1435.21Show/hide
Query:  EIELVIQKQLHDTNLNKNHERLSVPIKK-LRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKI-----GSSDLYCLITHWNSFVQ
        + +L+ +K L  T++N    RLS+P    LR DF+T  E+ ++N+ D+NN  NK G+  +++D   ++  + LK+W++       S  Y LI  WN  V+
Subjt:  EIELVIQKQLHDTNLNKNHERLSVPIKK-LRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKI-----GSSDLYCLITHWNSFVQ

Query:  QNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPDIS
         N LK GD + LWSFR  G+           LCFAM +   S
Subjt:  QNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPDIS

Q9LRX6 Putative B3 domain-containing protein At3g248505.8e-1333.8Show/hide
Query:  EIELVIQKQLHDTNLNKNHERLSVPIKK-LRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKI-----GSSDLYCLITHWNSFVQ
        + +L+ +K L  T++N    RLS+P    L+ DF+T  E++++ + D+NN K K G+  +++D    +  + LK+W++       S  Y LI  WN  V+
Subjt:  EIELVIQKQLHDTNLNKNHERLSVPIKK-LRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKI-----GSSDLYCLITHWNSFVQ

Query:  QNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPDIS
         N LK GD + +WSFR  GV           LCFAM +   S
Subjt:  QNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPDIS

Q9LSF7 B3 domain-containing protein At3g251822.0e-1334.56Show/hide
Query:  EIELVIQKQLHDTNLNKNHERLSVPIKK-LRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKI-----GSSDLYCLITHWNSFVQ
        + +L+ +K L  T++N    RLS+P    LR DF+T  E+++++ +D+ N K K G+  +++D   ++  + LK+W++       S  Y LI  WN  V+
Subjt:  EIELVIQKQLHDTNLNKNHERLSVPIKK-LRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKI-----GSSDLYCLITHWNSFVQ

Query:  QNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAM
         N LK GD + LWSFR  G+           LCFAM
Subjt:  QNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAM

Q9XIP5 Putative B3 domain-containing protein At2g274105.2e-1432.61Show/hide
Query:  EIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRF-DFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHWNSFVQ
        E  GY  +L+  +QL+ T+L K   RLSVP K+++  DF+TE+E +++++  +  + N  G+ V  +DP L + V+ L+KWK+  + +Y  +  W + + 
Subjt:  EIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRF-DFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHWNSFVQ

Query:  --QNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAM
          +   K  DV  LWSFR            +  LCFA+
Subjt:  --QNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAM

Arabidopsis top hitse value%identityAlignment
AT1G05920.1 Domain of unknown function (DUF313)1.0e-1229.66Show/hide
Query:  GGYEIELVIQKQLHDTNLNKNHERLSVPIKK-LRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKI----GSSD-LYCLITHWNS
        G  + +L+I+K L   +++    RLS+PI   ++ DF+T +E++L+++ ++ N+ N  G+   ++D   ++  +  K+W +    GSS   + L   W++
Subjt:  GGYEIELVIQKQLHDTNLNKNHERLSVPIKK-LRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKI----GSSD-LYCLITHWNS

Query:  FVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPDIS
         V+ N LK GD + LWSFR + +           LCFA+  P  S
Subjt:  FVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPDIS

AT1G05930.1 Domain of unknown function (DUF313)1.5e-1128.77Show/hide
Query:  MRERIAEIGGYEIELVIQKQLHDTN-LNKNHERLSVPIKKL-RFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLIT
        +R+ + ++   ++ L+++K L  T+ +   H R S+   +L   DF+  EE  +L +   N++    G+  +++D   ++  + LK+W       Y L  
Subjt:  MRERIAEIGGYEIELVIQKQLHDTN-LNKNHERLSVPIKKL-RFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLIT

Query:  HWNSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKP
         WN  V+ N LK+GD + LW+FR DGV      +    LCFA+  P
Subjt:  HWNSFVQQNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKP

AT2G27410.1 Domain of unknown function (DUF313)3.7e-1532.61Show/hide
Query:  EIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRF-DFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHWNSFVQ
        E  GY  +L+  +QL+ T+L K   RLSVP K+++  DF+TE+E +++++  +  + N  G+ V  +DP L + V+ L+KWK+  + +Y  +  W + + 
Subjt:  EIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRF-DFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHWNSFVQ

Query:  --QNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAM
          +   K  DV  LWSFR            +  LCFA+
Subjt:  --QNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAM

AT3G24850.1 Domain of unknown function (DUF313)4.1e-1433.8Show/hide
Query:  EIELVIQKQLHDTNLNKNHERLSVPIKK-LRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKI-----GSSDLYCLITHWNSFVQ
        + +L+ +K L  T++N    RLS+P    L+ DF+T  E++++ + D+NN K K G+  +++D    +  + LK+W++       S  Y LI  WN  V+
Subjt:  EIELVIQKQLHDTNLNKNHERLSVPIKK-LRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKI-----GSSDLYCLITHWNSFVQ

Query:  QNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPDIS
         N LK GD + +WSFR  GV           LCFAM +   S
Subjt:  QNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPDIS

AT5G24050.1 Domain of unknown function (DUF313)2.8e-1535.21Show/hide
Query:  EIELVIQKQLHDTNLNKNHERLSVPIKK-LRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKI-----GSSDLYCLITHWNSFVQ
        + +L+ +K L  T++N    RLS+P    LR DF+T  E+ ++N+ D+NN  NK G+  +++D   ++  + LK+W++       S  Y LI  WN  V+
Subjt:  EIELVIQKQLHDTNLNKNHERLSVPIKK-LRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKI-----GSSDLYCLITHWNSFVQ

Query:  QNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPDIS
         N LK GD + LWSFR  G+           LCFAM +   S
Subjt:  QNSLKSGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPDIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGAGCGAATAGCAGAGATCGGCGGCTACGAAATCGAACTAGTGATTCAAAAGCAATTACATGACACTAATCTGAATAAAAACCACGAGCGATTGTCTGTTCCGAT
CAAGAAACTGAGATTCGATTTCGTAACAGAGGAAGAGGCAAAGTTGTTGAATCAACGCGATGTTAATAATAAAAAGAACAAAAAGGGAATTAATGTGATGATTATCGATC
CTGTTCTTCGAGAAAGTGTGATTTGCTTGAAAAAATGGAAGATTGGAAGCAGCGATCTCTACTGTTTGATAACTCATTGGAATTCTTTTGTTCAGCAAAATTCTTTGAAA
AGTGGTGACGTCGTCCAGCTTTGGAGCTTCAGAAAAGATGGCGTTGATGTTGCAAATGAAACCGAGATTTCTCATCATCTTTGCTTCGCCATGGCTAAGCCTGATATCTC
TAACTTTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGAGCGAATAGCAGAGATCGGCGGCTACGAAATCGAACTAGTGATTCAAAAGCAATTACATGACACTAATCTGAATAAAAACCACGAGCGATTGTCTGTTCCGAT
CAAGAAACTGAGATTCGATTTCGTAACAGAGGAAGAGGCAAAGTTGTTGAATCAACGCGATGTTAATAATAAAAAGAACAAAAAGGGAATTAATGTGATGATTATCGATC
CTGTTCTTCGAGAAAGTGTGATTTGCTTGAAAAAATGGAAGATTGGAAGCAGCGATCTCTACTGTTTGATAACTCATTGGAATTCTTTTGTTCAGCAAAATTCTTTGAAA
AGTGGTGACGTCGTCCAGCTTTGGAGCTTCAGAAAAGATGGCGTTGATGTTGCAAATGAAACCGAGATTTCTCATCATCTTTGCTTCGCCATGGCTAAGCCTGATATCTC
TAACTTTCGTTAA
Protein sequenceShow/hide protein sequence
MRERIAEIGGYEIELVIQKQLHDTNLNKNHERLSVPIKKLRFDFVTEEEAKLLNQRDVNNKKNKKGINVMIIDPVLRESVICLKKWKIGSSDLYCLITHWNSFVQQNSLK
SGDVVQLWSFRKDGVDVANETEISHHLCFAMAKPDISNFR