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Tan0022630 (gene) of Snake gourd v1 genome

Gene IDTan0022630
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDExH-box ATP-dependent RNA helicase DExH7, chloroplastic
Genome locationLG02:71586746..71588660
RNA-Seq ExpressionTan0022630
SyntenyTan0022630
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015014.1 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]5.7e-2584.21Show/hide
Query:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPT
        AS+ARSYDVIAEEYY   +EAAKAKEEGDKKRQE AGN IRKLK+E  AQGLSDDMLASEFE+GRA DNASKDAPT
Subjt:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPT
XP_022136496.1 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1 [Momordica charantia]1.5e-2583.54Show/hide
Query:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPTSPM
        ASQARSYDVIA EYY   +EAAKAKEEGDKKR+E AGNIIRKLK+E LAQGLSDDMLASEFEYGRAFDNASKD  T+ M
Subjt:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPTSPM
XP_022136497.1 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X2 [Momordica charantia]1.5e-2583.54Show/hide
Query:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPTSPM
        ASQARSYDVIA EYY   +EAAKAKEEGDKKR+E AGNIIRKLK+E LAQGLSDDMLASEFEYGRAFDNASKD  T+ M
Subjt:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPTSPM
XP_022922708.1 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Cucurbita moschata]5.7e-2584.21Show/hide
Query:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPT
        AS+ARSYDVIAEEYY   +EAAKAKEEGDKKRQE AGN IRKLK+E  AQGLSDDMLASEFE+GRA DNASKDAPT
Subjt:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPT
XP_023552212.1 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Cucurbita pepo subsp. pepo]5.7e-2584.21Show/hide
Query:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPT
        AS+ARSYDVIAEEYY   +EAAKAKEEGDKKRQE AGN IRKLK+E  AQGLSDDMLASEFE+GRA DNASKDAPT
Subjt:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPT
TrEMBL top hitse value%identityAlignment
A0A1S4E0Z2 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X25.8e-2380.52Show/hide
Query:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPTS
        ASQARSYDVIAEEYY   ++AAKAKEEGDKKRQE AGNIIRKLK+E LAQGLS DMLASEFEYGRA DN  KD   S
Subjt:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPTS
A0A6J1C3N5 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X17.3e-2683.54Show/hide
Query:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPTSPM
        ASQARSYDVIA EYY   +EAAKAKEEGDKKR+E AGNIIRKLK+E LAQGLSDDMLASEFEYGRAFDNASKD  T+ M
Subjt:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPTSPM
A0A6J1C5N3 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X27.3e-2683.54Show/hide
Query:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPTSPM
        ASQARSYDVIA EYY   +EAAKAKEEGDKKR+E AGNIIRKLK+E LAQGLSDDMLASEFEYGRAFDNASKD  T+ M
Subjt:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPTSPM
A0A6J1E7M1 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic2.8e-2584.21Show/hide
Query:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPT
        AS+ARSYDVIAEEYY   +EAAKAKEEGDKKRQE AGN IRKLK+E  AQGLSDDMLASEFE+GRA DNASKDAPT
Subjt:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPT
A0A6J1J9M9 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic6.2e-2584Show/hide
Query:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAP
        AS+ARSYDVIAEEYY   +EAAKAKEEGDKKRQE+AGN IRKLK+E  AQGLSDDMLASEFE+GRA DNASKDAP
Subjt:  ASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAP
SwissProt top hitse value%identityAlignment
F4I9Q5 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic2.2e-1150Show/hide
Query:  SQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPTSPM
        S  R +DVIA+EYY    +A KAKE+ DK+ QE AG  IRKLK+E    GLS+ ML SEF+   AF++A++   T P+
Subjt:  SQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPTSPM
Q9C6G0 DExH-box ATP-dependent RNA helicase DExH4, chloroplastic1.6e-0651.56Show/hide
Query:  SQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGR
        S  RS++VIA+EY V    A KAK +GDK  Q  AG  I KLKEE  A G S+ +L SEF+  R
Subjt:  SQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGR
Arabidopsis top hitse value%identityAlignment
AT1G58050.1 RNA helicase family protein1.2e-0751.56Show/hide
Query:  SQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGR
        S  RS++VIA+EY V    A KAK +GDK  Q  AG  I KLKEE  A G S+ +L SEF+  R
Subjt:  SQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGR
AT1G58060.1 RNA helicase family protein1.6e-1250Show/hide
Query:  SQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPTSPM
        S  R +DVIA+EYY    +A KAKE+ DK+ QE AG  IRKLK+E    GLS+ ML SEF+   AF++A++   T P+
Subjt:  SQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSDDMLASEFEYGRAFDNASKDAPTSPM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATGATCTCCATTTGACTATCAATTTCTTGGAGAGATTTCAACAAATGAATACAATCGGATCCCATAACCTCACAAATTACTTCCAAATGCATATGCCAAGAAA
TTTCATGATTGAAAGAAAAGCTTTGTGTTTTGCAGATAGGATGTGTTTTTATGTGATGGCTTCTCAAGCAAGGTCTTATGACGTTATTGCGGAAGAATATTATGTTACAT
GGATGGAAGCTGCAAAAGCAAAGGAAGAAGGGGACAAGAAAAGGCAAGAAATGGCAGGCAACATTATTCGAAAGCTTAAGGAGGAGTTTTTAGCTCAAGGATTATCGGAT
GATATGTTGGCCTCTGAATTTGAATATGGAAGAGCTTTTGATAATGCATCAAAGGATGCGCCTACGAGTCCCATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATGATCTCCATTTGACTATCAATTTCTTGGAGAGATTTCAACAAATGAATACAATCGGATCCCATAACCTCACAAATTACTTCCAAATGCATATGCCAAGAAA
TTTCATGATTGAAAGAAAAGCTTTGTGTTTTGCAGATAGGATGTGTTTTTATGTGATGGCTTCTCAAGCAAGGTCTTATGACGTTATTGCGGAAGAATATTATGTTACAT
GGATGGAAGCTGCAAAAGCAAAGGAAGAAGGGGACAAGAAAAGGCAAGAAATGGCAGGCAACATTATTCGAAAGCTTAAGGAGGAGTTTTTAGCTCAAGGATTATCGGAT
GATATGTTGGCCTCTGAATTTGAATATGGAAGAGCTTTTGATAATGCATCAAAGGATGCGCCTACGAGTCCCATGTAA
Protein sequenceShow/hide protein sequence
MVDDLHLTINFLERFQQMNTIGSHNLTNYFQMHMPRNFMIERKALCFADRMCFYVMASQARSYDVIAEEYYVTWMEAAKAKEEGDKKRQEMAGNIIRKLKEEFLAQGLSD
DMLASEFEYGRAFDNASKDAPTSPM