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Tan0022646 (gene) of Snake gourd v1 genome

Gene IDTan0022646
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 10
Genome locationLG09:43052378..43061547
RNA-Seq ExpressionTan0022646
SyntenyTan0022646
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637268.1 hypothetical protein CSA_017684 [Cucumis sativus]1.0e-0750Show/hide
Query:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRG
        +SWLIC+V I+MLV  QEV A   +LK  + C+ P+PPPSCSS            H   N Y RGCS I+RCRG
Subjt:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRG
KAG7020863.1 hypothetical protein SDJN02_17551, partial [Cucurbita argyrosperma subsp. argyrosperma]7.9e-0851.32Show/hide
Query:  ICLVLITMLVTGQEV------AADITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
        ICL LITML+T Q+V       + I YLK ++C+ PNPP  CS S  +G       HV AN Y RGCS I+RCRGG
Subjt:  ICLVLITMLVTGQEV------AADITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]2.9e-1056Show/hide
Query:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
        +SWLICLVLI MLV  Q+VA++  +LK  D C QPNPPP CS  N           V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
XP_023533089.1 protein RALF-like 10 [Cucurbita pepo subsp. pepo]1.4e-0954.67Show/hide
Query:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
        +SWLIC+VLI+MLV  QEVA++  +LK  D C QPNPP  CS  N           V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
XP_038877580.1 protein RALF-like 11 [Benincasa hispida]1.3e-1054.67Show/hide
Query:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
        +SWLIC+V I+MLV G  VAA+  YL+ +D CNQPNPPP+CS    +         V AN Y RGCS I+RCRGG
Subjt:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
TrEMBL top hitse value%identityAlignment
A0A0A0LI94 Uncharacterized protein1.8e-1054.67Show/hide
Query:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
        +SWLICL LI MLV GQEVAA+  +LK +D CNQP+PPP+C + +             AN Y R CS INRCRGG
Subjt:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
A0A0A0LZK3 Uncharacterized protein5.8e-0445.33Show/hide
Query:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
        +SWLIC  L++MLV   EVAA+  +L   D C QP+PP SC                S   Y RGCS I RCRGG
Subjt:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
A0A0A0M0X3 Uncharacterized protein5.0e-0850Show/hide
Query:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRG
        +SWLIC+V I+MLV  QEV A   +LK  + C+ P+PPPSCSS            H   N Y RGCS I+RCRG
Subjt:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRG
A0A1S4DY33 protein RALF-like 308.0e-0649.33Show/hide
Query:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
        +SWLIC  L++MLV G EVAA   +LK +D C QP+PP SC                S  AY RGCS I RCRGG
Subjt:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
A0A6J1G7J2 protein RALF-like 101.4e-1056Show/hide
Query:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
        +SWLICLVLI MLV  Q+VA++  +LK  D C QPNPPP CS  N           V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLITMLVTGQEVAADITYLKLVD-CNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG
SwissProt top hitse value%identityAlignment
F4ISE2 Protein RALF-like 132.5e-0437.84Show/hide
Query:  QSWLICLVLITMLVTGQEVAAD--ITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCR
        ++W+ICL++I   V  + V +   I Y  +  C  PNPPP C+    E     P      N Y+RGCS I+RCR
Subjt:  QSWLICLVLITMLVTGQEVAAD--ITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCR
O64466 Protein RALF-like 112.9e-0540.54Show/hide
Query:  QSWLICLVLITMLVTGQEVAAD--ITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCR
        ++WLICL++I   V  + V +   I Y  +  C  PNPPP C+    E    TP      N Y+RGCS I+RCR
Subjt:  QSWLICLVLITMLVTGQEVAAD--ITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCR
Q9LSG0 Protein RALF-like 254.2e-0442.11Show/hide
Query:  MKQSWLICLVLITMLVTGQEVAAD--ITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCR
        MK   +I LV+ ++L+ G+  A D    YL L  C +PN PP C     +     P T V  N Y+RGC+TINRCR
Subjt:  MKQSWLICLVLITMLVTGQEVAAD--ITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCR
Arabidopsis top hitse value%identityAlignment
AT2G19030.1 ralf-like 112.1e-0640.54Show/hide
Query:  QSWLICLVLITMLVTGQEVAAD--ITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCR
        ++WLICL++I   V  + V +   I Y  +  C  PNPPP C+    E    TP      N Y+RGCS I+RCR
Subjt:  QSWLICLVLITMLVTGQEVAAD--ITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCR
AT2G19040.1 RALF-like 121.1e-0437.84Show/hide
Query:  QSWLICLVLITMLVTGQEVAAD--ITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCR
        ++W+I L++I  +V  + V +   I Y  +  C  PNPPP C+    E    TP      N Y+RGCS I+RCR
Subjt:  QSWLICLVLITMLVTGQEVAAD--ITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCR
AT2G19045.1 RALF-like 131.8e-0537.84Show/hide
Query:  QSWLICLVLITMLVTGQEVAAD--ITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCR
        ++W+ICL++I   V  + V +   I Y  +  C  PNPPP C+    E     P      N Y+RGCS I+RCR
Subjt:  QSWLICLVLITMLVTGQEVAAD--ITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCR
AT3G25165.1 ralf-like 253.0e-0542.11Show/hide
Query:  MKQSWLICLVLITMLVTGQEVAAD--ITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCR
        MK   +I LV+ ++L+ G+  A D    YL L  C +PN PP C     +     P T V  N Y+RGC+TINRCR
Subjt:  MKQSWLICLVLITMLVTGQEVAAD--ITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAGTCATGGCTCATTTGTTTAGTTCTTATTACCATGTTAGTGACAGGACAAGAAGTAGCAGCGGACATAACATATCTTAAACTAGTGGATTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTTCATCGAATGGAGAAGGTTCTTGTAACACCCCTTCTACACATGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTACCATTAATCGTTGTC
GTGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAGTCATGGCTCATTTGTTTAGTTCTTATTACCATGTTAGTGACAGGACAAGAAGTAGCAGCGGACATAACATATCTTAAACTAGTGGATTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTTCATCGAATGGAGAAGGTTCTTGTAACACCCCTTCTACACATGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTACCATTAATCGTTGTC
GTGGAGGATGA
Protein sequenceShow/hide protein sequence
MKQSWLICLVLITMLVTGQEVAADITYLKLVDCNQPNPPPSCSSSNGEGSCNTPSTHVSANAYTRGCSTINRCRGG