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Tan0022673 (gene) of Snake gourd v1 genome

Gene IDTan0022673
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionML domain-containing protein
Genome locationLG08:65438662..65441635
RNA-Seq ExpressionTan0022673
SyntenyTan0022673
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR003172 - MD-2-related lipid-recognition domain
IPR014756 - Immunoglobulin E-set
IPR039670 - Sterol transport protein NPC2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136524.1 MD-2-related lipid-recognition protein ROSY1 [Cucumis sativus]5.4e-7287.1Show/hide
Query:  MEPFIQMKLFFSFLLWFSFVPQF-FTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP  QMKL F FLLW  F PQF F+TR+QLCDE AKYDI VKGVEISP+P+VRGHPTNM FNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPFIQMKLFFSFLLWFSFVPQF-FTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YSFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y  GDFAL  L+TPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YSFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_008442939.1 PREDICTED: uncharacterized protein LOC103486693 [Cucumis melo]7.1e-7287.1Show/hide
Query:  MEPFIQMKLFFSFLLWFSFVPQF-FTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP  QMKL F FLLW  F PQF F TRVQLCDE A+YDI VKGVEISPSP+VRGHPTNMTFNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPFIQMKLFFSFLLWFSFVPQF-FTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YSFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y  GDFAL  L+TPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YSFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_022940446.1 uncharacterized protein LOC111445883 isoform X2 [Cucurbita moschata]7.1e-7285.71Show/hide
Query:  MEPFIQMKLFFSFLLWFSFVPQFFTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPY
        MEP + MKL FSFLLW SFVPQFF TRV LCDE AKYDI+VKGVEISPSP+VRGHPTNMT NLIIGKPIIAGKMVVDI YFGWH+YSDS+DICVETSCPY
Subjt:  MEPFIQMKLFFSFLLWFSFVPQFFTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPY

Query:  SFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        + GDFALA  QTPLAFF+PGSYHMQITI+DG DNKLTCFGFDYELVIASLFG S
Subjt:  SFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_023538983.1 uncharacterized protein LOC111799753 isoform X2 [Cucurbita pepo subsp. pepo]2.7e-7185.06Show/hide
Query:  MEPFIQMKLFFSFLLWFSFVPQFFTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPY
        MEP + MKL FSFLLW SFVPQFF TRV LCDE AKYDI+VKGVEISPSP+VRGHPTNMT NLIIGKPIIAGKMVVDI YFGWH+YSDS+DICVETSCPY
Subjt:  MEPFIQMKLFFSFLLWFSFVPQFFTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPY

Query:  SFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        + GDFALA  QTPLAFF+PGSYHMQITI+DG DNKLTCFGFDYELVI SLFG S
Subjt:  SFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

XP_038905833.1 uncharacterized protein LOC120091785 [Benincasa hispida]5.4e-7287.1Show/hide
Query:  MEPFIQMKLFFSFLLWFSFVPQF-FTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP  QMKL F  LLW  FVPQF F T+VQLCDE AKYD+ VKGVEISPSP+VRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYS+SHDICVETSCP
Subjt:  MEPFIQMKLFFSFLLWFSFVPQF-FTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YSFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        YSFGDFAL   +TPLAFFLPGSYHMQITIVDGDDNKLTCF FDYELVIASLFGDS
Subjt:  YSFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

TrEMBL top hitse value%identityAlignment
A0A1S3B7M8 uncharacterized protein LOC1034866933.4e-7287.1Show/hide
Query:  MEPFIQMKLFFSFLLWFSFVPQF-FTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP  QMKL F FLLW  F PQF F TRVQLCDE A+YDI VKGVEISPSP+VRGHPTNMTFNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPFIQMKLFFSFLLWFSFVPQF-FTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YSFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y  GDFAL  L+TPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YSFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A5D3DP69 Putative phosphatidylglycerol/phosphatidylinositol transfer protein3.4e-7287.1Show/hide
Query:  MEPFIQMKLFFSFLLWFSFVPQF-FTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP  QMKL F FLLW  F PQF F TRVQLCDE A+YDI VKGVEISPSP+VRGHPTNMTFNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSCP
Subjt:  MEPFIQMKLFFSFLLWFSFVPQF-FTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YSFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y  GDFAL  L+TPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Subjt:  YSFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A6J1FIH7 uncharacterized protein LOC111445883 isoform X23.4e-7285.71Show/hide
Query:  MEPFIQMKLFFSFLLWFSFVPQFFTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPY
        MEP + MKL FSFLLW SFVPQFF TRV LCDE AKYDI+VKGVEISPSP+VRGHPTNMT NLIIGKPIIAGKMVVDI YFGWH+YSDS+DICVETSCPY
Subjt:  MEPFIQMKLFFSFLLWFSFVPQFFTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPY

Query:  SFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        + GDFALA  QTPLAFF+PGSYHMQITI+DG DNKLTCFGFDYELVIASLFG S
Subjt:  SFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A6J1J1A9 uncharacterized protein LOC1114817844.2e-7085.81Show/hide
Query:  MEPFIQMKLFFSFLLWFSFVPQF-FTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP   MKL F+ LLW  FV QF F TRVQLCDE AKYDI+VKGV+ISPSP+VRG P  MTFNLIIGKPIIAGKMVVDISYFGWH+Y DSHDICVETSCP
Subjt:  MEPFIQMKLFFSFLLWFSFVPQF-FTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YSFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        YSFGDFALA LQTPLAFFLPGSYHMQITIVDGDDNKL CFGFDYELVIASLFGDS
Subjt:  YSFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

A0A6J1KWB4 uncharacterized protein LOC111498769 isoform X23.2e-7084.52Show/hide
Query:  MEPF-IQMKLFFSFLLWFSFVPQFFTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP
        MEP  + MKL FSFLLW SFVP FF TRV LCDE AKYDI+VKGVEISPSP+VRGHPTNMT NLIIGKPIIAGKMVVDI YFGWH+YSDS+DICVETSCP
Subjt:  MEPF-IQMKLFFSFLLWFSFVPQFFTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCP

Query:  YSFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
        Y+ GDFALA  QTPLAFF+PGSYHMQITI+DG DNKLTCFGFDYELVIASLFG S
Subjt:  YSFGDFALASLQTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G16005.1 MD-2-related lipid recognition domain-containing protein2.3e-0426.98Show/hide
Query:  KLFFSFLLWFSFVPQFFTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMV-VDISYFGWHIYSDSHDICVETSCPYSFGDFA
        +L    L+   F P     + Q CD   +Y + V  VEISP P+ R     +T   +  K I  G  V + ++   + + + S+ +C  T+CP + G   
Subjt:  KLFFSFLLWFSFVPQFFTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMV-VDISYFGWHIYSDSHDICVETSCPYSFGDFA

Query:  LA--SLQTPLAFFLPGSYHMQITIVD
        L   ++ TP        Y + I+I D
Subjt:  LA--SLQTPLAFFLPGSYHMQITIVD

AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein2.3e-2839.84Show/hide
Query:  TRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSFGDFALASLQTPLAFFLPGSYHMQ
        T V  CD   +Y++ V+GV+I+P P+ RG P     +      I +GK+V+++SYFGWHI+S++HD+C ETSCP + GDF +A  Q    +  PGSY ++
Subjt:  TRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSFGDFALASLQTPLAFFLPGSYHMQ

Query:  ITIVDGDDNKLTCFGFDYELVIASLFGD
        + ++DG   +LTC  F +++   S   D
Subjt:  ITIVDGDDNKLTCFGFDYELVIASLFGD

AT3G11780.2 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein1.4e-2536.3Show/hide
Query:  TRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSFGDFALASLQ-----TP-------
        T V  CD   +Y++ V+GV+I+P P+ RG P     +      I +GK+V+++SYFGWHI+S++HD+C ETSCP + GDF +A  Q     TP       
Subjt:  TRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSFGDFALASLQ-----TP-------

Query:  ------LAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGD
                F + GSY +++ ++DG   +LTC  F +++   S   D
Subjt:  ------LAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGD

AT3G44100.1 MD-2-related lipid recognition domain-containing protein9.7e-1933.82Show/hide
Query:  LLWFSFVPQFFTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSFGDFALASLQTP
        LL   F+P    T    CD+     + V GV+ISP P+V G           G+ I  GK+V+ + Y G  +++++HD+C ET+CP + G F L+  QT 
Subjt:  LLWFSFVPQFFTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSFGDFALASLQTP

Query:  LAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIAS
         +   PG+Y +++TI D +  +LTC  F +++ + S
Subjt:  LAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIAS

AT5G06480.1 Immunoglobulin E-set superfamily protein3.0e-2839.68Show/hide
Query:  VQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSFGDFALASLQTPLAFFLPGSYHMQIT
        V  C+E A+Y++ VK V+ISP+P+  G P   T +   G+ I  GK+V+++SYFGWH++S++HD+C ETSCP   GDF +A  Q    +  PGSY +++ 
Subjt:  VQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSFGDFALASLQTPLAFFLPGSYHMQIT

Query:  IVDGDDNKLTCFGFDYELVIASLFGD
        ++D    +LTC  F +++ + +   D
Subjt:  IVDGDDNKLTCFGFDYELVIASLFGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCCTTTATTCAGATGAAGCTGTTTTTTTCATTTCTTCTATGGTTCAGTTTTGTTCCACAGTTCTTCACCACTCGAGTTCAACTCTGCGATGAGATGGCTAAGTA
TGATATCGTGGTGAAAGGAGTAGAGATATCTCCCAGCCCCCTAGTTAGAGGTCACCCAACAAATATGACCTTCAATCTAATTATAGGTAAGCCAATCATTGCAGGAAAAA
TGGTAGTTGATATTTCATATTTCGGATGGCACATATATAGTGACAGCCATGACATTTGTGTTGAGACGTCCTGCCCCTATTCGTTTGGTGATTTTGCACTCGCTTCATTG
CAAACGCCTCTGGCATTCTTTTTACCTGGTTCATATCATATGCAGATAACCATTGTTGATGGAGATGATAATAAACTTACATGCTTTGGCTTTGATTATGAATTGGTGAT
TGCATCACTATTTGGAGATAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACCCTTTATTCAGATGAAGCTGTTTTTTTCATTTCTTCTATGGTTCAGTTTTGTTCCACAGTTCTTCACCACTCGAGTTCAACTCTGCGATGAGATGGCTAAGTA
TGATATCGTGGTGAAAGGAGTAGAGATATCTCCCAGCCCCCTAGTTAGAGGTCACCCAACAAATATGACCTTCAATCTAATTATAGGTAAGCCAATCATTGCAGGAAAAA
TGGTAGTTGATATTTCATATTTCGGATGGCACATATATAGTGACAGCCATGACATTTGTGTTGAGACGTCCTGCCCCTATTCGTTTGGTGATTTTGCACTCGCTTCATTG
CAAACGCCTCTGGCATTCTTTTTACCTGGTTCATATCATATGCAGATAACCATTGTTGATGGAGATGATAATAAACTTACATGCTTTGGCTTTGATTATGAATTGGTGAT
TGCATCACTATTTGGAGATAGCTAA
Protein sequenceShow/hide protein sequence
MEPFIQMKLFFSFLLWFSFVPQFFTTRVQLCDEMAKYDIVVKGVEISPSPLVRGHPTNMTFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSFGDFALASL
QTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS