; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0022675 (gene) of Snake gourd v1 genome

Gene IDTan0022675
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCytochrome b6-f complex subunit 7
Genome locationLG02:9571658..9572817
RNA-Seq ExpressionTan0022675
SyntenyTan0022675
Gene Ontology termsGO:0009512 - cytochrome b6f complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR012595 - PetM of cytochrome b6/f complex subunit 7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136999.1 uncharacterized protein LOC101210164 [Cucumis sativus]4.2e-5370.41Show/hide
Query:  MNHPYSSHLIHFSPSSFSIQTPFFHHLHSSISPNFPQIPLPHRFNPSNLSFPSGFSFNLTLPSLPLLFQASMATASATLSPAMSTAAPLAAASRRQRHVN
        MNHP SS+LIH    SFSIQT F        SP     PL     P ++S    F+F     ++P      MATASATLS AMS+AAP++A SRRQR  N
Subjt:  MNHPYSSHLIHFSPSSFSIQTPFFHHLHSSISPNFPQIPLPHRFNPSNLSFPSGFSFNLTLPSLPLLFQASMATASATLSPAMSTAAPLAAASRRQRHVN

Query:  VHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEEAE
         HFISGLNSF GLKAHNNVVSLGLPVCADQSFA IVSSLKYPSKGKGK+GGGAL+STCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  VHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEEAE

XP_008454894.1 PREDICTED: uncharacterized protein LOC103495201 [Cucumis melo]1.8e-5192Show/hide
Query:  MATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAII
        MATASATLS AMSTAAP+AA SRRQR  NVH+I+GLNSFGGLKAHNNVVSLGLPVCADQSFA IVSSLKYPSKGKGK+GGGAL+STCNAAGEIFRIAAII
Subjt:  MATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

XP_022972366.1 uncharacterized protein LOC111470941 [Cucurbita maxima]2.3e-5190.32Show/hide
Query:  ATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAIIN
        ATASATLSPA+STAAP+AA SRRQR+ NVH+I+GLNSFGGLKAHNN+ SLGLPVCADQSFANIVSSLKYPSKGKGK+GGGAL+STCNAAGEIFRIAAIIN
Subjt:  ATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

XP_023554105.1 uncharacterized protein LOC111811473 [Cucurbita pepo subsp. pepo]8.8e-5189.52Show/hide
Query:  ATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAIIN
        ATASATLSP +STAAP+AA SRRQR+ NVH+I+GLNSFGGLKAHNN+ SLGLPVCADQSFANIVSSLKYPSKGKGK+GGGAL+STCNAAGEIFRIAAIIN
Subjt:  ATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

XP_038887487.1 uncharacterized protein LOC120077620 [Benincasa hispida]3.6e-5292Show/hide
Query:  MATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAII
        MATASATLSPAM TAAP+AA SRRQR  NVH+I+GLNSFGGLKAHNNVVSLGLPVCADQSFANI+SSLKYPSKGKGK+GGGAL+STCNAAGEIFRIAAII
Subjt:  MATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

TrEMBL top hitse value%identityAlignment
A0A0A0K4W4 Uncharacterized protein1.0e-5771.36Show/hide
Query:  MNHPYSSHLIHFSPSSFSIQT--------PFFHHLHSSISPNFPQIPLPHRFNPSNLSFPSGFSFNLTLP-SLPLLF-QASMATASATLSPAMSTAAPLA
        MNHP SS+LIH    SFSIQT        P   HL  + +  F    +P  F P N  FPS FS N+    SLPLL     MATASATLS AMS+AAP++
Subjt:  MNHPYSSHLIHFSPSSFSIQT--------PFFHHLHSSISPNFPQIPLPHRFNPSNLSFPSGFSFNLTLP-SLPLLF-QASMATASATLSPAMSTAAPLA

Query:  AASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEA
        A SRRQR  N HFISGLNSF GLKAHNNVVSLGLPVCADQSFA IVSSLKYPSKGKGK+GGGAL+STCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEA
Subjt:  AASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEA

Query:  SVEEAE
        SVEEAE
Subjt:  SVEEAE

A0A1S3C0U4 uncharacterized protein LOC1034952018.6e-5292Show/hide
Query:  MATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAII
        MATASATLS AMSTAAP+AA SRRQR  NVH+I+GLNSFGGLKAHNNVVSLGLPVCADQSFA IVSSLKYPSKGKGK+GGGAL+STCNAAGEIFRIAAII
Subjt:  MATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

A0A6J1C3G5 uncharacterized protein LOC1110080071.3e-4786.72Show/hide
Query:  MATASATLSPAMSTAAPLAAASRR-QRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKS--GGGALASTCNAAGEIFRIA
        MATASATLSPAMSTAAP+AA SRR QRH NVH+I+GLNSFGGLKAHNNVVSLGLP+C D SFA IVSSLKYPSKGKGK+  GGGAL+STCNAAGEIFRIA
Subjt:  MATASATLSPAMSTAAPLAAASRR-QRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKS--GGGALASTCNAAGEIFRIA

Query:  AIINGLVLIGVAVGFVLLRIEASVEEAE
        AIINGLVL+GVAVGFVLLRIEA VEE E
Subjt:  AIINGLVLIGVAVGFVLLRIEASVEEAE

A0A6J1GND2 uncharacterized protein LOC1114555032.3e-4987.1Show/hide
Query:  ATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAIIN
        AT SATLSP +STAAP+AA SRRQR+ NVH+I+GLNSF GLKAHNN+ SLGLPVCADQSFA+IVSSLKYPSKGKGK+GGGAL+STCNAAGEIFRIAAIIN
Subjt:  ATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

A0A6J1I5T0 uncharacterized protein LOC1114709411.1e-5190.32Show/hide
Query:  ATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAIIN
        ATASATLSPA+STAAP+AA SRRQR+ NVH+I+GLNSFGGLKAHNN+ SLGLPVCADQSFANIVSSLKYPSKGKGK+GGGAL+STCNAAGEIFRIAAIIN
Subjt:  ATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

SwissProt top hitse value%identityAlignment
P80883 Cytochrome b6-f complex subunit 7 (Fragment)1.6e-0780.56Show/hide
Query:  NAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEE
        NAA EIFRIAA++NGL L+GVA+GFVLLRIEA+VEE
Subjt:  NAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEE

Arabidopsis top hitse value%identityAlignment
AT2G26500.1 cytochrome b6f complex subunit (petM), putative9.4e-2756.35Show/hide
Query:  ATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNN-VVSLGLPVCADQSFANIVSSLKYPSKGKGKSG-GGALASTCNAAGEIFRIAAI
        A A A +S   S     +  ++++  + V +I+GLNS+GGLKA NN VVS+G P+C +Q FAN+V SL      KG+ G GGAL++TCNA GEIF+IAAI
Subjt:  ATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNN-VVSLGLPVCADQSFANIVSSLKYPSKGKGKSG-GGALASTCNAAGEIFRIAAI

Query:  INGLVLIGVAVGFVLLRIEASVEEAE
        +N L L+GVAVGFVLLRIE SVEEAE
Subjt:  INGLVLIGVAVGFVLLRIEASVEEAE

AT2G26500.2 cytochrome b6f complex subunit (petM), putative9.4e-2756.35Show/hide
Query:  ATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNN-VVSLGLPVCADQSFANIVSSLKYPSKGKGKSG-GGALASTCNAAGEIFRIAAI
        A A A +S   S     +  ++++  + V +I+GLNS+GGLKA NN VVS+G P+C +Q FAN+V SL      KG+ G GGAL++TCNA GEIF+IAAI
Subjt:  ATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNN-VVSLGLPVCADQSFANIVSSLKYPSKGKGKSG-GGALASTCNAAGEIFRIAAI

Query:  INGLVLIGVAVGFVLLRIEASVEEAE
        +N L L+GVAVGFVLLRIE SVEEAE
Subjt:  INGLVLIGVAVGFVLLRIEASVEEAE

AT2G26500.3 cytochrome b6f complex subunit (petM), putative7.3e-1138.4Show/hide
Query:  ATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNN-VVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAII
        A A A +S   S     +  ++++  + V +I+GLNS+GGLKA NN VVS+G P+C +Q FAN+V SLK                               
Subjt:  ATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSFGGLKAHNN-VVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
              G  VGFVLLRIE SVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCACCCATACTCTTCTCACCTTATCCATTTCTCCCCTTCATCTTTCTCCATACAAACCCCTTTTTTCCATCATCTTCATTCTTCAATCTCACCCAATTTCCCCCA
AATTCCTCTTCCACACAGGTTTAATCCTTCAAATCTCTCTTTCCCATCTGGGTTTTCCTTCAATTTGACTCTTCCTTCTCTTCCTCTTCTCTTTCAGGCTTCAATGGCGA
CCGCCTCCGCTACCCTCTCCCCCGCCATGTCCACCGCCGCCCCTCTTGCCGCCGCCTCCAGGCGGCAGAGGCACGTCAATGTCCACTTCATTTCTGGCCTCAACTCCTTT
GGCGGCTTGAAAGCTCACAACAATGTCGTCTCCTTGGGCCTTCCCGTTTGTGCCGATCAGTCATTTGCTAACATTGTGAGCTCTTTGAAATACCCATCAAAGGGAAAGGG
CAAAAGCGGCGGCGGGGCTCTGGCTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCCGCCATTATCAATGGCCTTGTTCTTATTGGAGTGGCTGTGGGGTTTG
TTCTTCTCCGGATTGAGGCATCTGTGGAGGAGGCTGAGTGA
mRNA sequenceShow/hide mRNA sequence
CTAAAAATTAAATAAATAAATAATAATAATAATAAATCCCTCCAAGTCCCACAGTAGATCACCATATTTCGTTGGCTAGCATTCAAAGATTTCACTCACAAAATCTTTAG
CAATTCTAATCTGTTTATGAACCACCCATACTCTTCTCACCTTATCCATTTCTCCCCTTCATCTTTCTCCATACAAACCCCTTTTTTCCATCATCTTCATTCTTCAATCT
CACCCAATTTCCCCCAAATTCCTCTTCCACACAGGTTTAATCCTTCAAATCTCTCTTTCCCATCTGGGTTTTCCTTCAATTTGACTCTTCCTTCTCTTCCTCTTCTCTTT
CAGGCTTCAATGGCGACCGCCTCCGCTACCCTCTCCCCCGCCATGTCCACCGCCGCCCCTCTTGCCGCCGCCTCCAGGCGGCAGAGGCACGTCAATGTCCACTTCATTTC
TGGCCTCAACTCCTTTGGCGGCTTGAAAGCTCACAACAATGTCGTCTCCTTGGGCCTTCCCGTTTGTGCCGATCAGTCATTTGCTAACATTGTGAGCTCTTTGAAATACC
CATCAAAGGGAAAGGGCAAAAGCGGCGGCGGGGCTCTGGCTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCCGCCATTATCAATGGCCTTGTTCTTATTGGA
GTGGCTGTGGGGTTTGTTCTTCTCCGGATTGAGGCATCTGTGGAGGAGGCTGAGTGATGATGATGATGATGATGATGATATTGTTCAGTTATCAGAATTTGTAAGTTAAA
ATCTGTTGTTTTTTTTTTACCAGTTACTTATTGTAGAACTCAATTGTTTCTGTCAGTATAAACAATTGACAATATTCATTTTGCCTCTTTGTCCCATCCTTTCTGTTTTC
TAAATAATGACATTGTAGTATATCTTCATTTGCTGCATATTCTTGTACATTTTTCTGCTGCTTGGATCTTGAGAACAATAAGAAATGAACTTTAATTTGCTGGCAGTTTC
TTGACACTTGAGACTGTTTTTAGAGTAGTTTCTTTTTACTAAGGAGTCTTAAAAGTTTAAGTTATTGTGCATTTGAAATCACTGATCATAAGTATATGATTTTGAGACGA
CAACAACTTTCTCGAGATACACTCAAAGAAAAAGAAGGAAACAACTCATTATAATCTGTG
Protein sequenceShow/hide protein sequence
MNHPYSSHLIHFSPSSFSIQTPFFHHLHSSISPNFPQIPLPHRFNPSNLSFPSGFSFNLTLPSLPLLFQASMATASATLSPAMSTAAPLAAASRRQRHVNVHFISGLNSF
GGLKAHNNVVSLGLPVCADQSFANIVSSLKYPSKGKGKSGGGALASTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEEAE