; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0022704 (gene) of Snake gourd v1 genome

Gene IDTan0022704
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationLG11:7586727..7587554
RNA-Seq ExpressionTan0022704
SyntenyTan0022704
Gene Ontology termsNA
InterPro domainsIPR040417 - Glycine-rich cell wall structural protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578789.1 hypothetical protein SDJN03_23237, partial [Cucurbita argyrosperma subsp. sororia]9.5e-3680.61Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPRRGFGE-GGGGGGGGGGGGLFPGSSY----GSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSGFGS
        MACSRA+G  LLALFLVD AFAARSPR  FGE GGGGGGGGGGGGLFPGS Y    GSGGGEGYGEG+GDG FGRGGGGGGGGGGGG   G+G GSGFGS
Subjt:  MACSRAIGATLLALFLVDLAFAARSPRRGFGE-GGGGGGGGGGGGLFPGSSY----GSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSGFGS

Query:  GSGSGFGRGGGGGGGGGRGGG-------GGGNGSGYGSGYGSGGGYGSGSGR-----GGGGGGGGGGGSSGSGSGFGSGYGSGYGSGRGGWDEISP
        GSGSGFGRG GGGGGGGRGGG       GGGNGSGYGSGYGSG G+GSG+GR     GGGGGGGGGGGS+GSGSG+GSGYGSGYGSGRGGW EISP
Subjt:  GSGSGFGRGGGGGGGGGRGGG-------GGGNGSGYGSGYGSGGGYGSGSGR-----GGGGGGGGGGGSSGSGSGFGSGYGSGYGSGRGGWDEISP

XP_008456803.1 PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]1.9e-3682.29Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPRRGFGE-----GGGGGGGGGGGGLFPGSSY--GSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSGF
        MA +RAIG TLLALFLVDLAFAAR+PR+GFGE     GGGG GGGGGGGLFPGS Y  GSGGGEGYGEGEGDGAFGRGGGGGGG GGGG G   GFGSGF
Subjt:  MACSRAIGATLLALFLVDLAFAARSPRRGFGE-----GGGGGGGGGGGGLFPGSSY--GSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSGF

Query:  GSGSGSGFGRGGGGGGGGGRGGG-----GGGNGSGYGSGYGSGGGYGSGSGR----GGGGGGGGGGGSSGSGSGFGSGYGSGYGSGRGGWDE
        G+GSGSGFG+GGGGGGGGGRGGG     GGGNGSGYGSGYGSGGGYGSG GR    GGGGGGGGGGGS+G+GSGFGSGYGSGYGSGRGGW+E
Subjt:  GSGSGSGFGRGGGGGGGGGRGGG-----GGGNGSGYGSGYGSGGGYGSGSGR----GGGGGGGGGGGSSGSGSGFGSGYGSGYGSGRGGWDE

XP_011650203.1 glycine-rich cell wall structural protein 2 [Cucumis sativus]2.1e-3584.49Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPRRGFGE-----GGGGGGGGGGGGLFPGS--SYGSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSGF
        MA +RAIGATLLALFLVDLAFAARSPR+GFGE     GGGG GGGGGGGLFPGS   YGSGGGEGYGEGEGDGAFGRGGGGGGG GGGG G   GFGSGF
Subjt:  MACSRAIGATLLALFLVDLAFAARSPRRGFGE-----GGGGGGGGGGGGLFPGS--SYGSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSGF

Query:  GSGSGSGFGRGGGGG---GGGGRGGGGGGNGSGYGSGYGSGGGYGS-GSGRGGGGGGGGGGGSSGSGSGFGSGYGSGYGSGRGGWDE
        GSGSGSGFG+ GGGG   GGGG GG GGGNGSGYGSGYGSGGGYGS G G GGGGGGGGGGGSSG+GSGFGSGYGSGYGSGRGGW+E
Subjt:  GSGSGSGFGRGGGGG---GGGGRGGGGGGNGSGYGSGYGSGGGYGS-GSGRGGGGGGGGGGGSSGSGSGFGSGYGSGYGSGRGGWDE

XP_022939145.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]8.3e-3277Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPRRGFGEGGGGGGGGGGGGLFPGSSY----GSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSGFGSG
        MACSRA+G  LLALFLVD AFAARSPR  FGEGGGGGGGGGGGGLF GS Y    GSGGGEGYGEG+GDG FGRGGGGG GGGGGG G G+G  SGFGSG
Subjt:  MACSRAIGATLLALFLVDLAFAARSPRRGFGEGGGGGGGGGGGGLFPGSSY----GSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSGFGSG

Query:  SGSGFGRGGGGGGGGGRGGG-------GGGNGSGYGSGYGSGGGYGSGSGRGGGGGG----------GGGGGSSGSGSGFGSGYGSGYGSGRGGWDEISP
        SGSGFGRG GGGGGGGRGGG       GGGNGSGYGSGYGSG G+GSGSGRGGGGGG          G GGGS+GSGSG+GS YGSGYGSGR GW EISP
Subjt:  SGSGFGRGGGGGGGGGRGGG-------GGGNGSGYGSGYGSGGGYGSGSGRGGGGGG----------GGGGGSSGSGSGFGSGYGSGYGSGRGGWDEISP

XP_023551514.1 glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo]4.9e-3277.5Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPRRGFGEGGGGGG----GGGGGGLFPGSSY----GSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSG
        MACSRA+G  LLALFLVD AFAARS R  FGEGGGGGG    GGGGGGLFPGS Y    GSGGGEGYGEGEGDG FGRGG G  GGGG   G+G+GFGSG
Subjt:  MACSRAIGATLLALFLVDLAFAARSPRRGFGEGGGGGG----GGGGGGLFPGSSY----GSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSG

Query:  FGSGSGSGFGRGGGGGGGGGRGGG-----GGGNGSGYGSGYGSGGGYGSGSGR--------GGGGGGGGGGGSSGSGSGFGSGYGSGYGSGRGGWDEISP
        FGSGSGSGFGRG GGGGGGGRGGG     GGGNGSGYGSGYGSG  +GSGSG+        GGGGGGGGGGGS+GSGSGFGSGYGSGYGSGRGGW EISP
Subjt:  FGSGSGSGFGRGGGGGGGGGRGGG-----GGGNGSGYGSGYGSGGGYGSGSGR--------GGGGGGGGGGGSSGSGSGFGSGYGSGYGSGRGGWDEISP

TrEMBL top hitse value%identityAlignment
A0A067L9H4 Uncharacterized protein7.7e-1565.35Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPR----RGFGEGGGGGGGGGGG---------------GLFPGSSYGSGGGEGYGEGEGDGAFGRGGGGGGGGGGG
        MA SR +GATLL L LVD+ FAARS +    RG G GGGGGGGGGGG               G   G  YGSGGGEGYG  EG G  G GGGGGGGG GG
Subjt:  MACSRAIGATLLALFLVDLAFAARSPR----RGFGEGGGGGGGGGGG---------------GLFPGSSYGSGGGEGYGEGEGDGAFGRGGGGGGGGGGG

Query:  GRGSGSGFGSGFGSGSGSGF----GRGGGGGGGGGRGGGGG-------GNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGSSGSGSGFGSGYGSGYGSG
          GSGSG+GSGFGSGSGSG+    G+GGGGGGGGGRGGGGG       G+GSGYGSGYGSG GYGSG GRGGGGGGGG GG  G G G G G GSGYGSG
Subjt:  GRGSGSGFGSGFGSGSGSGF----GRGGGGGGGGGRGGGGG-------GNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGSSGSGSGFGSGYGSGYGSG

Query:  RG
         G
Subjt:  RG

A0A0A0LML4 Uncharacterized protein1.0e-3584.49Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPRRGFGE-----GGGGGGGGGGGGLFPGS--SYGSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSGF
        MA +RAIGATLLALFLVDLAFAARSPR+GFGE     GGGG GGGGGGGLFPGS   YGSGGGEGYGEGEGDGAFGRGGGGGGG GGGG G   GFGSGF
Subjt:  MACSRAIGATLLALFLVDLAFAARSPRRGFGE-----GGGGGGGGGGGGLFPGS--SYGSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSGF

Query:  GSGSGSGFGRGGGGG---GGGGRGGGGGGNGSGYGSGYGSGGGYGS-GSGRGGGGGGGGGGGSSGSGSGFGSGYGSGYGSGRGGWDE
        GSGSGSGFG+ GGGG   GGGG GG GGGNGSGYGSGYGSGGGYGS G G GGGGGGGGGGGSSG+GSGFGSGYGSGYGSGRGGW+E
Subjt:  GSGSGSGFGRGGGGG---GGGGRGGGGGGNGSGYGSGYGSGGGYGS-GSGRGGGGGGGGGGGSSGSGSGFGSGYGSGYGSGRGGWDE

A0A1S3C3P6 glycine-rich cell wall structural protein 2-like9.3e-3782.29Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPRRGFGE-----GGGGGGGGGGGGLFPGSSY--GSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSGF
        MA +RAIG TLLALFLVDLAFAAR+PR+GFGE     GGGG GGGGGGGLFPGS Y  GSGGGEGYGEGEGDGAFGRGGGGGGG GGGG G   GFGSGF
Subjt:  MACSRAIGATLLALFLVDLAFAARSPRRGFGE-----GGGGGGGGGGGGLFPGSSY--GSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSGF

Query:  GSGSGSGFGRGGGGGGGGGRGGG-----GGGNGSGYGSGYGSGGGYGSGSGR----GGGGGGGGGGGSSGSGSGFGSGYGSGYGSGRGGWDE
        G+GSGSGFG+GGGGGGGGGRGGG     GGGNGSGYGSGYGSGGGYGSG GR    GGGGGGGGGGGS+G+GSGFGSGYGSGYGSGRGGW+E
Subjt:  GSGSGSGFGRGGGGGGGGGRGGG-----GGGNGSGYGSGYGSGGGYGSGSGR----GGGGGGGGGGGSSGSGSGFGSGYGSGYGSGRGGWDE

A0A1S3YPQ0 putative glycine-rich cell wall structural protein 18.5e-1468.69Show/hide
Query:  MACSRAIGATLLALFLVDLAFAAR--SPRRGFGEGGGGGGGGGGGG--LFPGSSYGS--GGGEGYGEGEGDGAFGRGGGGGGGGGGG---------GRGS
        M  S+ IGA LL L  VDLAFAAR    R G G GGGGGGGGGGGG  L  GS YGS  G GEG G GE DG FG GGGGGGGGGGG         GRGS
Subjt:  MACSRAIGATLLALFLVDLAFAAR--SPRRGFGEGGGGGGGGGGGG--LFPGSSYGS--GGGEGYGEGEGDGAFGRGGGGGGGGGGG---------GRGS

Query:  GSGFGSGFGSGSGSGFGRGGGGGGGGGRGGGGG-----GNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGG-----SSGSGSGFGSGYGSGYGSGRGG
        GSG+GSG+  GSG G GRGGGGGGGGG+GGGGG     GNGSGYGSG GSG GYGSG GRGGGGGGGGGGG     SSG+GSG+GS  GSGYGSG GG
Subjt:  GSGFGSGFGSGSGSGFGRGGGGGGGGGRGGGGG-----GNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGG-----SSGSGSGFGSGYGSGYGSGRGG

A0A6J1FLU7 glycine-rich cell wall structural protein 2-like4.0e-3277Show/hide
Query:  MACSRAIGATLLALFLVDLAFAARSPRRGFGEGGGGGGGGGGGGLFPGSSY----GSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSGFGSG
        MACSRA+G  LLALFLVD AFAARSPR  FGEGGGGGGGGGGGGLF GS Y    GSGGGEGYGEG+GDG FGRGGGGG GGGGGG G G+G  SGFGSG
Subjt:  MACSRAIGATLLALFLVDLAFAARSPRRGFGEGGGGGGGGGGGGLFPGSSY----GSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSGFGSG

Query:  SGSGFGRGGGGGGGGGRGGG-------GGGNGSGYGSGYGSGGGYGSGSGRGGGGGG----------GGGGGSSGSGSGFGSGYGSGYGSGRGGWDEISP
        SGSGFGRG GGGGGGGRGGG       GGGNGSGYGSGYGSG G+GSGSGRGGGGGG          G GGGS+GSGSG+GS YGSGYGSGR GW EISP
Subjt:  SGSGFGRGGGGGGGGGRGGG-------GGGNGSGYGSGYGSGGGYGSGSGRGGGGGG----------GGGGGSSGSGSGFGSGYGSGYGSGRGGWDEISP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTGCAGTAGAGCGATTGGGGCTACATTGTTGGCTCTGTTTCTCGTGGACCTCGCCTTCGCCGCCCGGTCACCGAGGAGAGGGTTCGGTGAAGGAGGAGGTGGGGG
AGGCGGCGGCGGAGGAGGAGGACTATTTCCAGGTTCGAGTTATGGATCGGGAGGAGGCGAAGGATACGGTGAGGGAGAAGGCGACGGAGCGTTCGGCAGAGGCGGCGGAG
GAGGTGGCGGTGGAGGTGGGGGCGGAAGGGGGTCCGGATCTGGATTTGGGTCAGGATTCGGATCTGGAAGCGGCTCGGGGTTTGGAAGAGGCGGCGGAGGGGGCGGTGGC
GGTGGTAGAGGAGGAGGCGGAGGCGGAAATGGATCAGGCTATGGCTCGGGATACGGCAGTGGAGGCGGATATGGAAGTGGGAGTGGCAGAGGAGGCGGTGGAGGCGGCGG
CGGTGGCGGAGGTTCTTCCGGGAGTGGCTCAGGGTTTGGTTCGGGATACGGATCGGGCTATGGATCCGGACGCGGAGGATGGGATGAAATTTCGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTGCAGTAGAGCGATTGGGGCTACATTGTTGGCTCTGTTTCTCGTGGACCTCGCCTTCGCCGCCCGGTCACCGAGGAGAGGGTTCGGTGAAGGAGGAGGTGGGGG
AGGCGGCGGCGGAGGAGGAGGACTATTTCCAGGTTCGAGTTATGGATCGGGAGGAGGCGAAGGATACGGTGAGGGAGAAGGCGACGGAGCGTTCGGCAGAGGCGGCGGAG
GAGGTGGCGGTGGAGGTGGGGGCGGAAGGGGGTCCGGATCTGGATTTGGGTCAGGATTCGGATCTGGAAGCGGCTCGGGGTTTGGAAGAGGCGGCGGAGGGGGCGGTGGC
GGTGGTAGAGGAGGAGGCGGAGGCGGAAATGGATCAGGCTATGGCTCGGGATACGGCAGTGGAGGCGGATATGGAAGTGGGAGTGGCAGAGGAGGCGGTGGAGGCGGCGG
CGGTGGCGGAGGTTCTTCCGGGAGTGGCTCAGGGTTTGGTTCGGGATACGGATCGGGCTATGGATCCGGACGCGGAGGATGGGATGAAATTTCGCCATGAAAACGAATCT
CTGATAGAAATAAGCACTTCGTTGAGTTACCGATTACAGTAGTTTGTTGCGATAGGCGTCTGATTGAAGAAGAAATACGAATAAAGGCGGCGGCGCCATTGACGGCCTCC
ATTGGAGGTTGCGAGTGGCGAGTCTGCATATCATAGAATAGAATCAATATTTATATGTGTAGTTACATTGTCATATTATGCATGCATATTTACATGTTAAATATCACGTC
ACGTTGTAGTATAATTTCCTAAAGTTAATGTAATGTTGTAGCCATATTATATTTCCAC
Protein sequenceShow/hide protein sequence
MACSRAIGATLLALFLVDLAFAARSPRRGFGEGGGGGGGGGGGGLFPGSSYGSGGGEGYGEGEGDGAFGRGGGGGGGGGGGGRGSGSGFGSGFGSGSGSGFGRGGGGGGG
GGRGGGGGGNGSGYGSGYGSGGGYGSGSGRGGGGGGGGGGGSSGSGSGFGSGYGSGYGSGRGGWDEISP