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Tan0022725 (gene) of Snake gourd v1 genome

Gene IDTan0022725
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionsuccinate dehydrogenase subunit 7B, mitochondrial-like
Genome locationLG09:72155872..72160779
RNA-Seq ExpressionTan0022725
SyntenyTan0022725
Gene Ontology termsGO:0005749 - mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (cellular component)
GO:0043495 - protein membrane anchor (molecular function)
InterPro domainsIPR034573 - Succinate dehydrogenase subunit 7, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587488.1 Succinate dehydrogenase subunit 7B, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4496Show/hide
Query:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
        MAFLLNKT LAS FRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVAGCCYEIYVKATMREEARQ KTASGST
Subjt:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
XP_022135509.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Momordica charantia]1.8e-4494Show/hide
Query:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
        MAF LN+TTLASHFRSQSQ DPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKR+GD+LTIVVVAGCCYEIYVKATMREEARQ KTASGST
Subjt:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
XP_022933942.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita moschata]1.5e-4395Show/hide
Query:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
        MAFLLNKT LAS FRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVAGCCYEIYVKATMREEARQ  TASGST
Subjt:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
XP_022969157.1 succinate dehydrogenase subunit 7A, mitochondrial-like [Cucurbita maxima]1.1e-4495Show/hide
Query:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
        MAFLLNKTTLASHFRSQSQ DPS+LSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVAGCCYEIYV+ATMREEARQ KTASGST
Subjt:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
XP_023529214.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita pepo subsp. pepo]2.2e-4597Show/hide
Query:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
        MAFLLNKTT ASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVAGCCYEIYVKATMREEARQ KTASGST
Subjt:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
TrEMBL top hitse value%identityAlignment
A0A6J1C1M2 succinate dehydrogenase subunit 7B, mitochondrial-like8.8e-4594Show/hide
Query:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
        MAF LN+TTLASHFRSQSQ DPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKR+GD+LTIVVVAGCCYEIYVKATMREEARQ KTASGST
Subjt:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
A0A6J1E5D6 succinate dehydrogenase subunit 7B, mitochondrial-like3.1e-4291Show/hide
Query:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
        MAFLL KT+LASHFRSQSQVDPSS SRRGFH+EPGTREKALLAEDPSLRRFRSHKKGV+RIK+IGDVLTIVVVAGCCYEIYVKATMREEARQ K AS ST
Subjt:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
A0A6J1F188 succinate dehydrogenase subunit 7B, mitochondrial-like7.5e-4495Show/hide
Query:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
        MAFLLNKT LAS FRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVAGCCYEIYVKATMREEARQ  TASGST
Subjt:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
A0A6J1HVK4 succinate dehydrogenase subunit 7A, mitochondrial-like5.2e-4595Show/hide
Query:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
        MAFLLNKTTLASHFRSQSQ DPS+LSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVAGCCYEIYV+ATMREEARQ KTASGST
Subjt:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
A0A6J1JM91 succinate dehydrogenase subunit 7A, mitochondrial-like7.0e-4292Show/hide
Query:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
        MAFLL KT LASHFRSQSQVDPSS SRRGFHVEPG REKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVAGCCYEIYVKATMREEARQ K AS ST
Subjt:  MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST
SwissProt top hitse value%identityAlignment
Q3E870 Succinate dehydrogenase subunit 7B, mitochondrial1.2e-3069.89Show/hide
Query:  MAFLLNKTTLASHFRSQSQV---DPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEA
        MAFLLN  +++SH RS S     D  S+SRRGFH+EPGTREKALLAED +L+RF+SHKK V ++KRIGDVLT+VVVAGCCYEIYVKA M++EA
Subjt:  MAFLLNKTTLASHFRSQSQV---DPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEA
Q6H611 Succinate dehydrogenase subunit 7, mitochondrial1.6e-1155.17Show/hide
Query:  RRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKA
        RRGFHVE G REKALL ED +L+RF+S+K  V ++ ++G++LT VV+  C YEI   A
Subjt:  RRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKA
Q9C5E8 Succinate dehydrogenase subunit 7A, mitochondrial7.2e-2872.04Show/hide
Query:  MAFLLNKTTLASHFRSQSQVDPSSL--SRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEAR
        MAFLLN T+++SH RS SQ    +L  SRRGFHVE G REKALLAED SLRRF+SHKKGV R+KRIGDVLT+VVVAGCCYEIY +  MR+EA+
Subjt:  MAFLLNKTTLASHFRSQSQVDPSSL--SRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEAR
Arabidopsis top hitse value%identityAlignment
AT3G47833.1 unknown protein5.1e-2972.04Show/hide
Query:  MAFLLNKTTLASHFRSQSQVDPSSL--SRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEAR
        MAFLLN T+++SH RS SQ    +L  SRRGFHVE G REKALLAED SLRRF+SHKKGV R+KRIGDVLT+VVVAGCCYEIY +  MR+EA+
Subjt:  MAFLLNKTTLASHFRSQSQVDPSSL--SRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEAR
AT5G62575.1 unknown protein6.5e-3270.65Show/hide
Query:  MAFLLNKTTLASHFRSQSQV--DPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEA
        MAFLLN  +++SH RS S    D  S+SRRGFH+EPGTREKALLAED +L+RF+SHKK V ++KRIGDVLT+VVVAGCCYEIYVKA M++EA
Subjt:  MAFLLNKTTLASHFRSQSQV--DPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEA
AT5G62575.2 unknown protein8.5e-3269.89Show/hide
Query:  MAFLLNKTTLASHFRSQSQV---DPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEA
        MAFLLN  +++SH RS S     D  S+SRRGFH+EPGTREKALLAED +L+RF+SHKK V ++KRIGDVLT+VVVAGCCYEIYVKA M++EA
Subjt:  MAFLLNKTTLASHFRSQSQV---DPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTTTTGCTTAACAAAACCACTCTTGCTTCTCATTTCCGATCTCAATCCCAGGTGGATCCTTCATCACTCTCGCGCCGTGGATTCCACGTCGAACCAGGGACTCG
TGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCTCTCGAATCAAAAGAATTGGAGATGTTCTGACAATTGTGGTTGTTG
CAGGATGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTAGACAGACAAAGACTGCCAGCGGAAGTACATGA
mRNA sequenceShow/hide mRNA sequence
CATATTCCCACTTTCTCTATAGAGTTGAAAGAACTCGAAGGTTTTCGAAGGGCAAAGCCCACTTTACCACATTTCTCCCTAATCTCACCATCACAGCTCTCCTCTTCCTT
CTCGCATCTTGTGCTCAGGAACAATGGCGTTTTTGCTTAACAAAACCACTCTTGCTTCTCATTTCCGATCTCAATCCCAGGTGGATCCTTCATCACTCTCGCGCCGTGGA
TTCCACGTCGAACCAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCTCTCGAATCAAAAGAATTGGAGA
TGTTCTGACAATTGTGGTTGTTGCAGGATGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTAGACAGACAAAGACTGCCAGCGGAAGTACATGATGGA
ATTAGTACCATCCAGTGACAATTAAAATGTCCGGCAAAAGTTTCCAATGCTTTTATTTGTGTGCTAAATAAATGTTTTTCAAGCACCAAATTCTATTTGCCCAATTTCTG
TTAGGTTTTAATCATCAATAATATTTTTTTGACCTGTATCAACCTAAGGGATGTCAGAATACATTTTTTTTTTTTTTAATCAATGTGAGCACCTTTTATTACCTTA
Protein sequenceShow/hide protein sequence
MAFLLNKTTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQTKTASGST