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Tan0022738 (gene) of Snake gourd v1 genome

Gene IDTan0022738
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationLG09:67861501..67861872
RNA-Seq ExpressionTan0022738
SyntenyTan0022738
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656027.1 glycine-rich protein DOT1 [Cucumis sativus]5.6e-1565.65Show/hide
Query:  MASIKAVAIVAFELGVS-----ESRVARKDL-----GLGVGTGVGLGLGLGGGSGS--GTGSGSGSGSGSSSASSSHSSSSS-----SGSDAGSYAGSYA
        MASIKA+A++   L +S       RVARKDL     GLGVG G+GLGLGLGGGSGS  G GSGSGSGSGS S+SSSHSSSSS     +GS+AGSYAGSYA
Subjt:  MASIKAVAIVAFELGVS-----ESRVARKDL-----GLGVGTGVGLGLGLGGGSGS--GTGSGSGSGSGSSSASSSHSSSSS-----SGSDAGSYAGSYA

Query:  GSRAGSGSGS----------GYGEGHGYGKG
        GSRAGSGSGS          GYGEGHGYG+G
Subjt:  GSRAGSGSGS----------GYGEGHGYGKG

XP_022135238.1 putative glycine-rich cell wall structural protein 1 [Momordica charantia]7.4e-1561.59Show/hide
Query:  MASIKAVAIVAFELG-----VSESRVARKDLGL---GVGTGVGLGLGLGGGSGSGT--GSGSGSGSGSSSASSSHSSSSSS----GSDAGSYAGSYAGSR
        MA+I+  A+VAF LG     VSE+RVARKDLG+   GVG G+G G+GLGGGSGSG+  G+GSGSGSGSSS+SSS+SSSSSS    GS+AGSYAGSYAGSR
Subjt:  MASIKAVAIVAFELG-----VSESRVARKDLGL---GVGTGVGLGLGLGGGSGSGT--GSGSGSGSGSSSASSSHSSSSSS----GSDAGSYAGSYAGSR

Query:  AGS--------------------GSGSGYGEGHGYGKG
        AGS                    GSG GYGEGHGYG+G
Subjt:  AGS--------------------GSGSGYGEGHGYGKG

XP_022921884.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]5.6e-1561.33Show/hide
Query:  MASIKAVAIVAFELG----VSESRVARKDLGL-------GVGTGVGLGLGLGGGSGSGTGSGSGSGSGSSSASSSHSSSSSSGSDAGSYAGSYAGSRAGS
        MASI+AV+I+A  L     VSESRVAR DLGL       G+GTGVGLGLG G GSGSG+GSGSGSGSGSSSASSSHSSSSSSGSDAGS AGSYAGS AGS
Subjt:  MASIKAVAIVAFELG----VSESRVARKDLGL-------GVGTGVGLGLGLGGGSGSGTGSGSGSGSGSSSASSSHSSSSSSGSDAGSYAGSYAGSRAGS

Query:  GS------------------------------GSGYGEGHGYGKGDDGEN
        GS                              G GYGEGHGY  G+DGEN
Subjt:  GS------------------------------GSGYGEGHGYGKGDDGEN

XP_022988595.1 putative glycine-rich cell wall structural protein 1 isoform X2 [Cucurbita maxima]5.6e-1567.8Show/hide
Query:  MASIKAVAIVAFELG----VSESRVARKDLGL---GVGTGVGLGLGLG-GGSGSGTGSGSGSGSGSSSASSSHSSSSSSGSDAGSYAGSYAGSRAGSGS-
        MAS   + ++ F L     VS++RVARKDLGL   G+G G+G G+GLG GGSGSG+GSGSGSGSGSSS+SSS+SSSSSSGS AGS AGSYAGSRAGSGS 
Subjt:  MASIKAVAIVAFELG----VSESRVARKDLGL---GVGTGVGLGLGLG-GGSGSGTGSGSGSGSGSSSASSSHSSSSSSGSDAGSYAGSYAGSRAGSGS-

Query:  -----GSGYGEGHGYGKG
             G GYGEGHGYG+G
Subjt:  -----GSGYGEGHGYGKG

XP_038879815.1 putative per-hexamer repeat protein 5 [Benincasa hispida]1.5e-1562.5Show/hide
Query:  MASIKAVAIVAFELG----VSESRVARKDL-------GLGVGTGVGLGLGLGGGSGSGTGSGSGSGSGSSSASSSHSSSSSSGSD----AGSYAGSYAGS
        MASI+AV I+AF LG    VSE RVAR +L       GLGVGTGVGLGLG G GSGSG+GSGSGSGSGSSSASSSHSSSSSSGSD    AGSYAGSYAGS
Subjt:  MASIKAVAIVAFELG----VSESRVARKDL-------GLGVGTGVGLGLGLGGGSGSGTGSGSGSGSGSSSASSSHSSSSSSGSD----AGSYAGSYAGS

Query:  RAGS------------------------GSGSGYGEGHGYGK----GDDGEN
        RAGS                        GSG GYGEGHGYG+    G+ GEN
Subjt:  RAGS------------------------GSGSGYGEGHGYGK----GDDGEN

TrEMBL top hitse value%identityAlignment
A0A0A0LW94 Uncharacterized protein2.7e-1565.65Show/hide
Query:  MASIKAVAIVAFELGVS-----ESRVARKDL-----GLGVGTGVGLGLGLGGGSGS--GTGSGSGSGSGSSSASSSHSSSSS-----SGSDAGSYAGSYA
        MASIKA+A++   L +S       RVARKDL     GLGVG G+GLGLGLGGGSGS  G GSGSGSGSGS S+SSSHSSSSS     +GS+AGSYAGSYA
Subjt:  MASIKAVAIVAFELGVS-----ESRVARKDL-----GLGVGTGVGLGLGLGGGSGS--GTGSGSGSGSGSSSASSSHSSSSS-----SGSDAGSYAGSYA

Query:  GSRAGSGSGS----------GYGEGHGYGKG
        GSRAGSGSGS          GYGEGHGYG+G
Subjt:  GSRAGSGSGS----------GYGEGHGYGKG

A0A6J1C497 putative glycine-rich cell wall structural protein 13.6e-1561.59Show/hide
Query:  MASIKAVAIVAFELG-----VSESRVARKDLGL---GVGTGVGLGLGLGGGSGSGT--GSGSGSGSGSSSASSSHSSSSSS----GSDAGSYAGSYAGSR
        MA+I+  A+VAF LG     VSE+RVARKDLG+   GVG G+G G+GLGGGSGSG+  G+GSGSGSGSSS+SSS+SSSSSS    GS+AGSYAGSYAGSR
Subjt:  MASIKAVAIVAFELG-----VSESRVARKDLGL---GVGTGVGLGLGLGGGSGSGT--GSGSGSGSGSSSASSSHSSSSSS----GSDAGSYAGSYAGSR

Query:  AGS--------------------GSGSGYGEGHGYGKG
        AGS                    GSG GYGEGHGYG+G
Subjt:  AGS--------------------GSGSGYGEGHGYGKG

A0A6J1E1T0 glycine-rich cell wall structural protein 2-like2.7e-1561.33Show/hide
Query:  MASIKAVAIVAFELG----VSESRVARKDLGL-------GVGTGVGLGLGLGGGSGSGTGSGSGSGSGSSSASSSHSSSSSSGSDAGSYAGSYAGSRAGS
        MASI+AV+I+A  L     VSESRVAR DLGL       G+GTGVGLGLG G GSGSG+GSGSGSGSGSSSASSSHSSSSSSGSDAGS AGSYAGS AGS
Subjt:  MASIKAVAIVAFELG----VSESRVARKDLGL-------GVGTGVGLGLGLGGGSGSGTGSGSGSGSGSSSASSSHSSSSSSGSDAGSYAGSYAGSRAGS

Query:  GS------------------------------GSGYGEGHGYGKGDDGEN
        GS                              G GYGEGHGY  G+DGEN
Subjt:  GS------------------------------GSGYGEGHGYGKGDDGEN

A0A6J1JHN1 glycine-rich cell wall structural protein 2-like isoform X36.1e-1572.97Show/hide
Query:  MASIKAVAIVAFELG----VSESRVARKDLGL-------GVGTGVGLGLGLGGGSGSGTGSGSGSGSGSSSASSSHSSSSSSGSDAGSYAGSYAGSRAGS
        MASI+AV+I+A  L     VSESRVAR DLGL       G+GTGVGLGLG  GGSGSG+GSGSGSGSGSSS+SSS+SSSSSSGS AGS AGSYAGSRAGS
Subjt:  MASIKAVAIVAFELG----VSESRVARKDLGL-------GVGTGVGLGLGLGGGSGSGTGSGSGSGSGSSSASSSHSSSSSSGSDAGSYAGSYAGSRAGS

Query:  GSGSGYGEGHG
        GSGSG G   G
Subjt:  GSGSGYGEGHG

A0A6J1JK06 putative glycine-rich cell wall structural protein 1 isoform X22.7e-1567.8Show/hide
Query:  MASIKAVAIVAFELG----VSESRVARKDLGL---GVGTGVGLGLGLG-GGSGSGTGSGSGSGSGSSSASSSHSSSSSSGSDAGSYAGSYAGSRAGSGS-
        MAS   + ++ F L     VS++RVARKDLGL   G+G G+G G+GLG GGSGSG+GSGSGSGSGSSS+SSS+SSSSSSGS AGS AGSYAGSRAGSGS 
Subjt:  MASIKAVAIVAFELG----VSESRVARKDLGL---GVGTGVGLGLGLG-GGSGSGTGSGSGSGSGSSSASSSHSSSSSSGSDAGSYAGSYAGSRAGSGS-

Query:  -----GSGYGEGHGYGKG
             G GYGEGHGYG+G
Subjt:  -----GSGYGEGHGYGKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein1.6e-1263.54Show/hide
Query:  VAIVAFELGVSESRVARKDL-----GLGVGTGVGLGLGLGGGSGSGTGSGSGSGSG----SSSASSSHSSSSSSGSDAGSYAGSYAGSRAGSGSGS
        + +++  + ++ESR+ARKDL     G+G+G GVGLG+GLGGGSGSG G+GSGSGSG    SSS+SSS SSSS SG  AGS AGS+AGSRAGSGSG+
Subjt:  VAIVAFELGVSESRVARKDL-----GLGVGTGVGLGLGLGGGSGSGTGSGSGSGSG----SSSASSSHSSSSSSGSDAGSYAGSYAGSRAGSGSGS

AT4G30460.1 glycine-rich protein2.5e-1364.81Show/hide
Query:  IVAFELGVSESRVARKDLGL---GVGTGVGLGLGL-GGGSGSGTGSGSGSGSGSSSASSSHSSSSSS-----GSDAGSYAGSYAGSRAGSGSGSGYGEGH
        I+A  + VSESRVARKDLGL   G+G G+G+G+G+ GGGSGSG G+GSGSG G SS+SSS SSSSSS     G DAGS AGSYAGS AGSGSG   G G 
Subjt:  IVAFELGVSESRVARKDLGL---GVGTGVGLGLGL-GGGSGSGTGSGSGSGSGSSSASSSHSSSSSS-----GSDAGSYAGSYAGSRAGSGSGSGYGEGH

Query:  GYGKGDDG
        G G G  G
Subjt:  GYGKGDDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATCAAGGCTGTTGCCATTGTTGCTTTCGAACTTGGCGTGTCAGAAAGCCGCGTGGCCAGGAAGGACTTGGGCCTCGGTGTTGGCACGGGGGTGGGCTTGGG
CTTGGGCTTAGGCGGTGGGAGTGGAAGTGGAACTGGCTCGGGTTCCGGATCCGGATCTGGGTCTAGTTCTGCTTCATCATCACACTCCTCAAGCTCCAGCTCTGGCTCCG
ATGCTGGTTCGTACGCCGGCTCTTACGCAGGGTCTCGGGCCGGATCCGGATCGGGTTCAGGATATGGTGAGGGCCATGGCTATGGCAAAGGTGATGACGGTGAAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATCAAGGCTGTTGCCATTGTTGCTTTCGAACTTGGCGTGTCAGAAAGCCGCGTGGCCAGGAAGGACTTGGGCCTCGGTGTTGGCACGGGGGTGGGCTTGGG
CTTGGGCTTAGGCGGTGGGAGTGGAAGTGGAACTGGCTCGGGTTCCGGATCCGGATCTGGGTCTAGTTCTGCTTCATCATCACACTCCTCAAGCTCCAGCTCTGGCTCCG
ATGCTGGTTCGTACGCCGGCTCTTACGCAGGGTCTCGGGCCGGATCCGGATCGGGTTCAGGATATGGTGAGGGCCATGGCTATGGCAAAGGTGATGACGGTGAAAACTGA
Protein sequenceShow/hide protein sequence
MASIKAVAIVAFELGVSESRVARKDLGLGVGTGVGLGLGLGGGSGSGTGSGSGSGSGSSSASSSHSSSSSSGSDAGSYAGSYAGSRAGSGSGSGYGEGHGYGKGDDGEN