; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0022756 (gene) of Snake gourd v1 genome

Gene IDTan0022756
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING-type domain-containing protein
Genome locationLG03:75723132..75723707
RNA-Seq ExpressionTan0022756
SyntenyTan0022756
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025673.1 RING-H2 finger protein ATL72-like [Cucumis melo var. makuwa]1.1e-7980.31Show/hide
Query:  MNSVQDLGYTYRRLLKD-SLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQ-LTAMPIYIYSDSSSNPSSSNCF
        MNSV DLGY+ RRLLKD SL + PFG RERIVTIC TS IAA+FV SLFISLFTCFRRQLN    SSKP +STCSSQ LT MP+YIY DSSSN  SS CF
Subjt:  MNSVQDLGYTYRRLLKD-SLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQ-LTAMPIYIYSDSSSNPSSSNCF

Query:  TSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL
        T SFESRNCVICLAEFE+GDELR+LPNCKH FHKGCIDQWLPLRSLLCPLCR+ TI+E+ TMRRP+C+NYW RNPAFILAFGLGSN PLPSQL
Subjt:  TSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL

XP_008440820.1 PREDICTED: RING-H2 finger protein ATL72-like [Cucumis melo]1.1e-7980.31Show/hide
Query:  MNSVQDLGYTYRRLLKD-SLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQ-LTAMPIYIYSDSSSNPSSSNCF
        MNSV DLGY+ RRLLKD SL + PFG RERIVTIC TS IAA+FV SLFISLFTCFRRQLN    SSKP +STCSSQ LT MP+YIY DSSSN  SS CF
Subjt:  MNSVQDLGYTYRRLLKD-SLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQ-LTAMPIYIYSDSSSNPSSSNCF

Query:  TSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL
        T SFESRNCVICLAEFE+GDELR+LPNCKH FHKGCIDQWLPLRSLLCPLCR+ TI+E+ TMRRP+C+NYW RNPAFILAFGLGSN PLPSQL
Subjt:  TSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL

XP_011658497.1 E3 ubiquitin-protein ligase RHA2B [Cucumis sativus]1.0e-8080.73Show/hide
Query:  MNSVQDLGYTYRRLLKDSLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQ-LTAMPIYIYSDSSSNPSSSNCFT
        MNSV DLGY+ RRLLKDSL + PFG RERIVTIC TS IAA+FV SLFISLFTCFRRQLN    SSKP +STCSSQ LT MP+YIY DSSSN  SS CFT
Subjt:  MNSVQDLGYTYRRLLKDSLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQ-LTAMPIYIYSDSSSNPSSSNCFT

Query:  SSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL
         SFESR CVICLAEFE+GDELR+LPNCKH FHKGCIDQWLPLRSLLCPLCR+ TI+E+ TMRRPVC+NYW RNPAFILAFGLGSN PLPSQL
Subjt:  SSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL

XP_022133218.1 RING-H2 finger protein ATL79-like [Momordica charantia]1.8e-7775Show/hide
Query:  MNSVQDLGYTYRRLLKDSLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQLTAMPIYIYSDSSSNPSSSNCFTS
        MNS+Q+LG +YRRLLKDS+ +HPFG RER +TICVTS+I AVFVFSLFIS  TCFRR++N   SSSKPPTS+CS+QLT MP+YIY DSS NP       S
Subjt:  MNSVQDLGYTYRRLLKDSLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQLTAMPIYIYSDSSSNPSSSNCFTS

Query:  SFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTI-EEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL
        SFES+NCVICLAEFEHGDE+R+LPNC+HAFHKGCIDQWL L SLLCPLCRDCT  EE+ TMRRP CTN W RNPAFILAFGLGSN+P+PSQ+
Subjt:  SFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTI-EEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL

XP_038881295.1 RING-H2 finger protein ATL79-like [Benincasa hispida]4.8e-8682.72Show/hide
Query:  MNSVQDLGYTYRRLLKDSLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQLTAMPIYIYSDSSSNPSSSNCFTS
        MNSV  LGY+YRRLLKDSL +HPFG RERIVTIC TSVIAA+FV SLFISLFTCFR QLN    SSKPP ST SSQLT MP+YIY D SS+PSSS CFTS
Subjt:  MNSVQDLGYTYRRLLKDSLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQLTAMPIYIYSDSSSNPSSSNCFTS

Query:  SFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL
        SFE RNCVICLAEF+HGDELR+LPNCKHAFHKGCIDQWL LRSLLCPLCRD T EE+GTMRRP+C+NYW RNPAFILAFGLGSN+PLPSQL
Subjt:  SFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL

TrEMBL top hitse value%identityAlignment
A0A0A0KKP7 RING-type domain-containing protein5.0e-8180.73Show/hide
Query:  MNSVQDLGYTYRRLLKDSLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQ-LTAMPIYIYSDSSSNPSSSNCFT
        MNSV DLGY+ RRLLKDSL + PFG RERIVTIC TS IAA+FV SLFISLFTCFRRQLN    SSKP +STCSSQ LT MP+YIY DSSSN  SS CFT
Subjt:  MNSVQDLGYTYRRLLKDSLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQ-LTAMPIYIYSDSSSNPSSSNCFT

Query:  SSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL
         SFESR CVICLAEFE+GDELR+LPNCKH FHKGCIDQWLPLRSLLCPLCR+ TI+E+ TMRRPVC+NYW RNPAFILAFGLGSN PLPSQL
Subjt:  SSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL

A0A1S3B2S4 RING-H2 finger protein ATL72-like5.6e-8080.31Show/hide
Query:  MNSVQDLGYTYRRLLKD-SLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQ-LTAMPIYIYSDSSSNPSSSNCF
        MNSV DLGY+ RRLLKD SL + PFG RERIVTIC TS IAA+FV SLFISLFTCFRRQLN    SSKP +STCSSQ LT MP+YIY DSSSN  SS CF
Subjt:  MNSVQDLGYTYRRLLKD-SLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQ-LTAMPIYIYSDSSSNPSSSNCF

Query:  TSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL
        T SFESRNCVICLAEFE+GDELR+LPNCKH FHKGCIDQWLPLRSLLCPLCR+ TI+E+ TMRRP+C+NYW RNPAFILAFGLGSN PLPSQL
Subjt:  TSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL

A0A5D3CLV8 RING-H2 finger protein ATL72-like5.6e-8080.31Show/hide
Query:  MNSVQDLGYTYRRLLKD-SLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQ-LTAMPIYIYSDSSSNPSSSNCF
        MNSV DLGY+ RRLLKD SL + PFG RERIVTIC TS IAA+FV SLFISLFTCFRRQLN    SSKP +STCSSQ LT MP+YIY DSSSN  SS CF
Subjt:  MNSVQDLGYTYRRLLKD-SLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQ-LTAMPIYIYSDSSSNPSSSNCF

Query:  TSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL
        T SFESRNCVICLAEFE+GDELR+LPNCKH FHKGCIDQWLPLRSLLCPLCR+ TI+E+ TMRRP+C+NYW RNPAFILAFGLGSN PLPSQL
Subjt:  TSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL

A0A6J1BYH3 RING-H2 finger protein ATL79-like8.9e-7875Show/hide
Query:  MNSVQDLGYTYRRLLKDSLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQLTAMPIYIYSDSSSNPSSSNCFTS
        MNS+Q+LG +YRRLLKDS+ +HPFG RER +TICVTS+I AVFVFSLFIS  TCFRR++N   SSSKPPTS+CS+QLT MP+YIY DSS NP       S
Subjt:  MNSVQDLGYTYRRLLKDSLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQLTAMPIYIYSDSSSNPSSSNCFTS

Query:  SFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTI-EEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL
        SFES+NCVICLAEFEHGDE+R+LPNC+HAFHKGCIDQWL L SLLCPLCRDCT  EE+ TMRRP CTN W RNPAFILAFGLGSN+P+PSQ+
Subjt:  SFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTI-EEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL

A0A6J1GEN4 RING-H2 finger protein ATL74-like6.4e-7674.61Show/hide
Query:  MNSVQDLGYTYRRLLKDSLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQLTAMPIYIYSDSSSNPSSSNCFT-
        MNS Q  GYTYRRLLKDSLL  PFG  ER+VTICV S IAA FV SLFISLFTCFRRQL    +SSKPP+STCS QL++MP+YIY D     S+  CFT 
Subjt:  MNSVQDLGYTYRRLLKDSLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQLTAMPIYIYSDSSSNPSSSNCFT-

Query:  -SSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL
         SSFE+RNCVICLAEFE GDELR+LPNCKHAFHKGCIDQWLPLRSLLCPLCR+ +I+E+GTMR+PVCTN+W RNPAF+LAF   SN PLPSQL
Subjt:  -SSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL

SwissProt top hitse value%identityAlignment
Q67YI6 RING-H2 finger protein ATL653.7e-1238.54Show/hide
Query:  SSKPPTSTCSSQLTAMPIYIYSDSSSNPSSSNCFTSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTM
        SS  P     S +  +P+++YS ++     +   TS+   R+C +CL EFE GD +R LP C HAFH  CID+WL      CPLCR   +   G +
Subjt:  SSKPPTSTCSSQLTAMPIYIYSDSSSNPSSSNCFTSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTM

Q6NML0 E3 ubiquitin-protein ligase ATL765.3e-1155.1Show/hide
Query:  CVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIE
        CVICL++F  G++LR+LP C H FH  CID+WL    L CP CR C +E
Subjt:  CVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIE

Q8GW38 RING-H2 finger protein ATL475.3e-1141.89Show/hide
Query:  LTAMPIYIYSDSSSNPSSSNCFTSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCR
        + A+P+++Y +             + E  +C +CL EF   D+LR+LPNC HAFH  CID WL L +  CPLCR
Subjt:  LTAMPIYIYSDSSSNPSSSNCFTSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCR

Q940Q4 RING-H2 finger protein ATL133.1e-1148.28Show/hide
Query:  NCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRP
        +C +CL EFE  D+LR+LP C HAFH  CID WL L    CPLCR   + ++ + + P
Subjt:  NCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRP

Q9FL07 RING-H2 finger protein ATL465.3e-1136.36Show/hide
Query:  LTAMPIYIYSDSSSNPSSSNCFTSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPV
        + A+P++ Y +   +        ++ E  +C +CL EF   D+LR+LP C HAFH  CID WL   S  CPLCR        +M  P+
Subjt:  LTAMPIYIYSDSSSNPSSSNCFTSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPV

Arabidopsis top hitse value%identityAlignment
AT1G23980.1 RING/U-box superfamily protein3.7e-1241.89Show/hide
Query:  LTAMPIYIYSDSSSNPSSSNCFTSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCR
        + A+P+++Y +             + E  +C +CL EF   D+LR+LPNC HAFH  CID WL L +  CPLCR
Subjt:  LTAMPIYIYSDSSSNPSSSNCFTSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCR

AT1G49210.1 RING/U-box superfamily protein3.7e-1255.1Show/hide
Query:  CVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIE
        CVICL++F  G++LR+LP C H FH  CID+WL    L CP CR C +E
Subjt:  CVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIE

AT3G18930.1 RING/U-box superfamily protein2.6e-1338.54Show/hide
Query:  SSKPPTSTCSSQLTAMPIYIYSDSSSNPSSSNCFTSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTM
        SS  P     S +  +P+++YS ++     +   TS+   R+C +CL EFE GD +R LP C HAFH  CID+WL      CPLCR   +   G +
Subjt:  SSKPPTSTCSSQLTAMPIYIYSDSSSNPSSSNCFTSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTM

AT3G18930.2 RING/U-box superfamily protein2.6e-1338.54Show/hide
Query:  SSKPPTSTCSSQLTAMPIYIYSDSSSNPSSSNCFTSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTM
        SS  P     S +  +P+++YS ++     +   TS+   R+C +CL EFE GD +R LP C HAFH  CID+WL      CPLCR   +   G +
Subjt:  SSKPPTSTCSSQLTAMPIYIYSDSSSNPSSSNCFTSSFESRNCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTM

AT4G30400.1 RING/U-box superfamily protein2.2e-1248.28Show/hide
Query:  NCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRP
        +C +CL EFE  D+LR+LP C HAFH  CID WL L    CPLCR   + ++ + + P
Subjt:  NCVICLAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCAGTGCAAGATCTTGGTTACACTTACAGACGCCTGCTTAAAGATTCCTTACTCGACCATCCATTTGGAGGCCGAGAAAGAATAGTTACCATATGTGTAACTTC
TGTCATCGCGGCCGTGTTCGTATTCTCTTTGTTCATCTCCCTCTTCACGTGCTTTCGACGTCAATTGAACCTTTATCCTTCCTCTTCTAAACCTCCCACATCCACATGTA
GTAGCCAACTCACTGCCATGCCTATTTATATCTATAGTGATTCATCTTCAAATCCTTCGTCGTCTAATTGTTTTACATCGTCATTCGAGTCCAGGAACTGTGTCATATGT
TTGGCGGAGTTCGAACATGGAGACGAGCTTCGTATACTGCCTAACTGTAAGCATGCGTTTCATAAAGGTTGCATTGATCAATGGCTTCCGTTGAGGTCGTTGCTTTGCCC
GCTTTGCCGAGACTGTACGATAGAGGAGATGGGGACCATGAGAAGACCTGTTTGTACGAATTATTGGCCCCGAAATCCAGCCTTCATATTGGCCTTCGGCCTTGGTAGTA
ATATCCCTCTACCCTCCCAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCAGTGCAAGATCTTGGTTACACTTACAGACGCCTGCTTAAAGATTCCTTACTCGACCATCCATTTGGAGGCCGAGAAAGAATAGTTACCATATGTGTAACTTC
TGTCATCGCGGCCGTGTTCGTATTCTCTTTGTTCATCTCCCTCTTCACGTGCTTTCGACGTCAATTGAACCTTTATCCTTCCTCTTCTAAACCTCCCACATCCACATGTA
GTAGCCAACTCACTGCCATGCCTATTTATATCTATAGTGATTCATCTTCAAATCCTTCGTCGTCTAATTGTTTTACATCGTCATTCGAGTCCAGGAACTGTGTCATATGT
TTGGCGGAGTTCGAACATGGAGACGAGCTTCGTATACTGCCTAACTGTAAGCATGCGTTTCATAAAGGTTGCATTGATCAATGGCTTCCGTTGAGGTCGTTGCTTTGCCC
GCTTTGCCGAGACTGTACGATAGAGGAGATGGGGACCATGAGAAGACCTGTTTGTACGAATTATTGGCCCCGAAATCCAGCCTTCATATTGGCCTTCGGCCTTGGTAGTA
ATATCCCTCTACCCTCCCAATTGTAA
Protein sequenceShow/hide protein sequence
MNSVQDLGYTYRRLLKDSLLDHPFGGRERIVTICVTSVIAAVFVFSLFISLFTCFRRQLNLYPSSSKPPTSTCSSQLTAMPIYIYSDSSSNPSSSNCFTSSFESRNCVIC
LAEFEHGDELRILPNCKHAFHKGCIDQWLPLRSLLCPLCRDCTIEEMGTMRRPVCTNYWPRNPAFILAFGLGSNIPLPSQL