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Tan0022827 (gene) of Snake gourd v1 genome

Gene IDTan0022827
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUbiquitin-like domain-containing protein
Genome locationLG08:7659828..7663181
RNA-Seq ExpressionTan0022827
SyntenyTan0022827
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586044.1 hypothetical protein SDJN03_18777, partial [Cucurbita argyrosperma subsp. sororia]1.0e-4596.08Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESL+DQP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVS NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS

Query:  GN
        GN
Subjt:  GN

KAG7020821.1 hypothetical protein SDJN02_17509 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-4695.15Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESL+DQP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEI+IVS NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

XP_008452565.1 PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo]2.6e-4694.17Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESL+DQPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEI+IV PNDFYQSRDADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

XP_022937980.1 uncharacterized protein LOC111444204 [Cucurbita moschata]4.0e-4796.12Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESL+DQP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVS NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

XP_038889494.1 uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida]2.4e-4795.15Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESL+DQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDN+FEEIDI+ PNDFYQSRDAD+
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

TrEMBL top hitse value%identityAlignment
A0A1S3BTJ1 uncharacterized protein LOC103493547 isoform X11.3e-4694.17Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESL+DQPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEI+IV PNDFYQSRDADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

A0A1S4DYF9 uncharacterized protein LOC103493547 isoform X25.3e-4594.17Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESL+DQPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK DN+FEEI+IV PNDFYQSRDADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

A0A5A7UM04 Ubiquitin1.8e-4594.06Show/hide
Query:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADSGN
        MYIRIKRHKTTYFIQCDPIETTLNIKQKLESL+DQPVVDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEI+IV PNDFYQSRDADSGN
Subjt:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADSGN

Query:  W
        W
Subjt:  W

A0A6J1FIC7 uncharacterized protein LOC1114442042.0e-4796.12Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESL+DQP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVS NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

A0A6J1HY58 uncharacterized protein LOC1114685512.0e-4796.12Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESL+DQP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVS NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADS

Query:  GNW
        GNW
Subjt:  GNW

SwissProt top hitse value%identityAlignment
P16709 viral Ubiquitin7.5e-0436Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLR
        M ++I+    K T   + +P ET  ++KQK+      PV  QRLI   +G+ LEDSKT+AD  ++ ++ + + LR
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLR

Arabidopsis top hitse value%identityAlignment
AT5G37640.1 ubiquitin 92.0e-0435.53Show/hide
Query:  MAMYIRIKR-HKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLR
        M+M I  K   + T  I     +T  N+K K++ +   P+  QRLI   SG++L+D +TLAD  ++ D+++ L LR
Subjt:  MAMYIRIKR-HKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLR

AT5G57860.1 Ubiquitin-like superfamily protein3.5e-3372.83Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDF
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +L++QPV +QRL+L+ + EVLEDSK+LADQKVENDAVVALTL+KDDNEFE+++I  P DF
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDF

AT5G57860.2 Ubiquitin-like superfamily protein3.5e-3372.83Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDF
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +L++QPV +QRL+L+ + EVLEDSK+LADQKVENDAVVALTL+KDDNEFE+++I  P DF
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDF

AT5G57860.3 Ubiquitin-like superfamily protein3.5e-3372.83Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDF
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +L++QPV +QRL+L+ + EVLEDSK+LADQKVENDAVVALTL+KDDNEFE+++I  P DF
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDF

AT5G57860.4 Ubiquitin-like superfamily protein2.6e-2069.7Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVEN
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +L++QPV +QRL+L+ + EVLEDSK+LADQKV +
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGTATATCCGAATCAAGCGCCATAAAACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAATATCAAGCAAAAATTAGAGTCCCTTGTTGATCA
ACCAGTAGTTGATCAGCGCTTGATCCTGGTGGGGAGTGGGGAAGTATTGGAGGATTCAAAGACACTGGCTGATCAGAAGGTCGAAAATGATGCAGTTGTGGCTCTAACGT
TGCGAAAAGACGATAACGAGTTCGAGGAGATCGACATTGTCAGTCCAAACGATTTCTACCAATCTCGTGATGCCGATTCTGGCAATTGGTAA
mRNA sequenceShow/hide mRNA sequence
GTCCAACCGAGTTTCCAAACGCTGACAACAAAGTCGTCCAAAGTGCTTGCGCTCATTCTTTTCCATTTCATCGCGATGGACTGAACGAACTTTCCCAAGCAAGAAACATC
TCGCCGATTTCCAGGGAATTTCTTGTGTGCTATCCATACTTCCATGACTTTTCGAACTGTGAACTTCAAGATTATGCGGAGAATTGATGAAGGTTGTATGTGAATTAGCG
GAATTCAAGTTTGTTACTGGCATTATCTTCTGTATACACGGTTATTTTCCTCATGGATCATATAAGTAGTTTGTAATTTCACGTACCAGATGAGAATCTGTCATAGATGT
TTTCTTATAAAATTTGCAATGTGACGAGTTGGATGAATGTTTGAGTTCAGACAGCGGCATTGGAGGCAGGAGTTATCGAAGTGTTGAGTTCTTGTTTCAAGATGGCCATG
TATATCCGAATCAAGCGCCATAAAACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAATATCAAGCAAAAATTAGAGTCCCTTGTTGATCAACCAGTAGT
TGATCAGCGCTTGATCCTGGTGGGGAGTGGGGAAGTATTGGAGGATTCAAAGACACTGGCTGATCAGAAGGTCGAAAATGATGCAGTTGTGGCTCTAACGTTGCGAAAAG
ACGATAACGAGTTCGAGGAGATCGACATTGTCAGTCCAAACGATTTCTACCAATCTCGTGATGCCGATTCTGGCAATTGGTAAGGACTGAAAATTTGCTTCTACTGTGGG
TAGTATATGATGTTCAACCATCAATCTTGTGGGGGTGTAGTGTTGAAATAACTTTTCTATCAGTGGGATGGAATTGAAAATGATGGATAAGAAAGTATACTCTATGCAGG
ATTAGATATTGATAACTCCATGCATTCTCTTTGTTACCTTGTTAAGTGGTATCCCCCAAAAGTTGCATTGGTGATTGAACTCATCCATGTATTGCTACAAGTACTATAAT
ATGAGTTGAGGATTTTGATACTAGGGCTTTTTAAATTGGCCTCAAACTATATGAATTAGTTTTTTAATTGAGTTGTAAATTGAATTTTTCTTATCGATATTATCATTA
Protein sequenceShow/hide protein sequence
MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLVDQPVVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSPNDFYQSRDADSGNW