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Tan0022833 (gene) of Snake gourd v1 genome

Gene IDTan0022833
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein SIS2
Genome locationLG11:14770085..14772545
RNA-Seq ExpressionTan0022833
SyntenyTan0022833
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601944.1 hypothetical protein SDJN03_07177, partial [Cucurbita argyrosperma subsp. sororia]1.4e-6193.1Show/hide
Query:  MSIPIPYTSIAMARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKF
        M+ PIPYTS AMARLLISTR FPFPPLP  PARA FRPSKLSPAVRFSGDPSA RALRVVTTRAGASTSSYIFAFSIP SLILVT LTALKIGDNLDKKF
Subjt:  MSIPIPYTSIAMARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
Subjt:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

KAG7032638.1 hypothetical protein SDJN02_06688 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-6193.1Show/hide
Query:  MSIPIPYTSIAMARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKF
        M+ PIPYTS AMARLLISTR FPFPPLP  PARAFFRPSKLSPAVRFSGDPSA RALRVVTTRAGASTSSYIFAFSIP SLILVT LTALKIGDNLDKKF
Subjt:  MSIPIPYTSIAMARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        LEELALNQAIMEEDEENKDGSSEISFE KPALPRTRNRPKREAEV
Subjt:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

XP_022961614.1 uncharacterized protein LOC111462310 [Cucurbita moschata]2.4e-6193.06Show/hide
Query:  MSIPIPYTSIAMARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKF
        M+ PIPYTS AMARLLISTR FPFPPLP  PARAFFRPSKLSPAVRFSGDPSA RALRVVTTRAGASTSSYIFAFSIP SLILVT LTALKIGDNLDKKF
Subjt:  MSIPIPYTSIAMARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREAE
        LEELALNQAIMEEDEENKDGSSEI FEEKPALPRTRNRPKREAE
Subjt:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREAE

XP_022990673.1 uncharacterized protein LOC111487491 [Cucurbita maxima]1.6e-5790.91Show/hide
Query:  MSIPIPYTSIAMARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKF
        M+ PIPYTS AMARLLISTR FPF   P  PARAFFRPSKLSPAVRFSGDPSA R LRVVTTRAGASTSSYIFAFSIP SLILVT LTALKIGDNLDKKF
Subjt:  MSIPIPYTSIAMARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA
        LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA
Subjt:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA

XP_023525740.1 uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo]2.5e-5895.52Show/hide
Query:  MARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKFLEELALNQAIM
        MARLLISTR FPFPPLP  PARAFFRPSKLSPAVRFSGDPSA RALRVVTTRAGASTSSYIFAFSIP SLILVT LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
Subjt:  EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

TrEMBL top hitse value%identityAlignment
A0A0A0KTR1 Uncharacterized protein6.1e-4782.84Show/hide
Query:  MARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPF  LP AP R FFRPS  SP VRF  +PS  R LRVVTTRAGASTSSYIFAFSIPLSLIL+TVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        EEDE+ +DG SEISFEEKP +PRTRNRPKREAEV
Subjt:  EEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

A0A6J1FJ66 uncharacterized protein LOC1114447535.9e-5086.67Show/hide
Query:  MARLLISTRT-FPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKFLEELALNQAI
        MARLLISTR  FP   LP APARAFFRPSKLSPAVRF GD SA + LR+VTTRAGASTSSYIFAFSIP SL+LVT LTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRT-FPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        MEEDEENKD  S ISFEEKPALPRTRNRPKREAEV
Subjt:  MEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

A0A6J1HEK5 uncharacterized protein LOC1114623101.2e-6193.06Show/hide
Query:  MSIPIPYTSIAMARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKF
        M+ PIPYTS AMARLLISTR FPFPPLP  PARAFFRPSKLSPAVRFSGDPSA RALRVVTTRAGASTSSYIFAFSIP SLILVT LTALKIGDNLDKKF
Subjt:  MSIPIPYTSIAMARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREAE
        LEELALNQAIMEEDEENKDGSSEI FEEKPALPRTRNRPKREAE
Subjt:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREAE

A0A6J1JTZ0 uncharacterized protein LOC1114874917.7e-5890.91Show/hide
Query:  MSIPIPYTSIAMARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKF
        M+ PIPYTS AMARLLISTR FPF   P  PARAFFRPSKLSPAVRFSGDPSA R LRVVTTRAGASTSSYIFAFSIP SLILVT LTALKIGDNLDKKF
Subjt:  MSIPIPYTSIAMARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA
        LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA
Subjt:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA

A0A6J1K146 uncharacterized protein LOC1114896902.5e-4885.19Show/hide
Query:  MARLLISTRT-FPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKFLEELALNQAI
        MARLLISTR  FP   LP  PARA FRPSKLSPAVRF GD SA + LR+VTTRAGASTSSYIFAFSI  SLILVT LTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRT-FPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV
        MEEDEENKD  S ISFEEKPALPRTRNRPKREAEV
Subjt:  MEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31560.1 high chlorophyll fluorescence 1535.5e-1644.29Show/hide
Query:  MARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRF----SGDPSAPRALR--VVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKFLEELA
        MARL +S    P  P   +   +  +P    PA  F    +G     R +R   V TRAG STSSY+ AF+IP +LI  TV T++KI D LD+ FLE++A
Subjt:  MARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRF----SGDPSAPRALR--VVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKFLEELA

Query:  LNQAIMEEDEENKDGSSEISFE---EKPALPRTRNRPKRE
        LNQAI +  E+ ++G  +IS +   ++P L RTRNRPKRE
Subjt:  LNQAIMEEDEENKDGSSEISFE---EKPALPRTRNRPKRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATTCCAATTCCTTACACTTCCATAGCTATGGCGAGGCTCCTTATCTCGACCCGAACCTTCCCTTTTCCCCCTCTTCCCGCCGCTCCGGCACGGGCATTCTTCAG
ACCCTCCAAATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCGGCGCCCAGAGCCCTACGAGTGGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCG
CCTTCTCCATCCCCCTCTCTCTTATTCTCGTCACTGTCCTCACCGCTCTTAAAATCGGCGATAACCTCGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATA
ATGGAGGAAGATGAAGAGAATAAAGATGGCAGTTCAGAAATATCATTTGAAGAAAAACCAGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCTGAGGTATAA
mRNA sequenceShow/hide mRNA sequence
GTTGGGGGTGCAACAGCCGGGAAGAATGAATTCTATTGGGCTAATTGCTTAGAGAGCTCCACTTGATTGGATTTGGGTCAGACCAGGCCGAACTTCATCAAAATCTGCTT
GGGCCATCCATTGTCATCAACATCCATTTACATGCTAACAACTTCAACCTTCAACAATGTCCATTCCAATTCCTTACACTTCCATAGCTATGGCGAGGCTCCTTATCTCG
ACCCGAACCTTCCCTTTTCCCCCTCTTCCCGCCGCTCCGGCACGGGCATTCTTCAGACCCTCCAAATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCGGCGCCCAG
AGCCCTACGAGTGGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCCCTCTCTCTTATTCTCGTCACTGTCCTCACCGCTCTTAAAA
TCGGCGATAACCTCGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATAATGGAGGAAGATGAAGAGAATAAAGATGGCAGTTCAGAAATATCATTTGAAGAA
AAACCAGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCTGAGGTATAAATAATTGCGTAGCTTTTTTCTTTGGAGGTGAACATGATCGAATCAGACGGCAGAGA
AATGGCTCAACGAACTAGGAAGCTTCCATGTATATTGTATGTAATTTTCTTCTTCTTTTTCTTTTTTGTCCTTATAATCCTTGGTAAAAAGTTAGTTTGTATGCTGAGTA
AATTTGATATTTAATAATATTGTTATATATTCTTCAAATTGAAATAGTTTTCTAATGGC
Protein sequenceShow/hide protein sequence
MSIPIPYTSIAMARLLISTRTFPFPPLPAAPARAFFRPSKLSPAVRFSGDPSAPRALRVVTTRAGASTSSYIFAFSIPLSLILVTVLTALKIGDNLDKKFLEELALNQAI
MEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV