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Tan0022837 (gene) of Snake gourd v1 genome

Gene IDTan0022837
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionneuronal acetylcholine receptor subunit alpha-2-like
Genome locationLG04:80654911..80655493
RNA-Seq ExpressionTan0022837
SyntenyTan0022837
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581289.1 hypothetical protein SDJN03_21291, partial [Cucurbita argyrosperma subsp. sororia]3.7e-2248.99Show/hide
Query:  KWDSARRA------WKIQTPRRC--PLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVV
        KWD+ARRA      WKI T RR     PV  R V RFIKRL+HP  TP PL P+ AERQFSFND P+ HLKLHRR P            +P  ++E    
Subjt:  KWDSARRA------WKIQTPRRC--PLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVV

Query:  DVGEDGGWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ
                            E EE+E+GID KAEKFIKMFYEEM+LQ+Q
Subjt:  DVGEDGGWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ

XP_008454304.1 PREDICTED: neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo]5.4e-2953.15Show/hide
Query:  NAKWDSARRAWKIQTPRRCPLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVVDVGEDG
        + K+   R+ WKI    R   PV  RP+RRFIKR+VH  +TP PLP HYAERQFSFNDTP+FH +         F +P F C+NPKVEFE       +D 
Subjt:  NAKWDSARRAWKIQTPRRCPLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVVDVGEDG

Query:  GWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ
         W+           E EE+EDGIDLKAEKFIKMFYEEMK+Q+Q
Subjt:  GWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ

XP_011652950.1 uncharacterized protein LOC105435158 [Cucumis sativus]7.8e-3660.42Show/hide
Query:  WDSARRAWKIQTPRRCPLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRR----PAAWFHLPWFWCMNPKVEFENCVVDVGED
        W    R WK+ + RR   PV  RP+RRFIKR++HP  TP PLPPHYAERQFSFNDTP+FHLK H RR     AA F +P F C+NPKVEFE       ED
Subjt:  WDSARRAWKIQTPRRCPLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRR----PAAWFHLPWFWCMNPKVEFENCVVDVGED

Query:  GGWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ
          W+RR         E EE+EDGIDLKAEKFIKMFYEEMK+Q+Q
Subjt:  GGWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ

XP_022934217.1 uncharacterized protein LOC111441455 [Cucurbita moschata]3.7e-2248.99Show/hide
Query:  KWDSARRA------WKIQTPRRC--PLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVV
        KWD+ARRA      WKI T RR     PV  R V RFIKRL+HP  TP PL P+ AERQFSFND P+ HLKLHRR P            +P  ++E    
Subjt:  KWDSARRA------WKIQTPRRC--PLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVV

Query:  DVGEDGGWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ
                            E EE+E+GID KAEKFIKMFYEEM+LQ+Q
Subjt:  DVGEDGGWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ

XP_038906165.1 uncharacterized protein LOC120092045 [Benincasa hispida]1.9e-4263.03Show/hide
Query:  MFNAKWDSARRAWKIQTPR-----RCPLPVVLRPVRRFIKRLVHPISTPAPLP--PHYAERQFSFNDTPVFHLKLHRRRP---AAWFHLPWFWCMNPKV-
        M N K  +ARR WKI   R     R P PV  RP+RRFIKRLVH ISTP P+P  PHY ERQFSFNDTP+FHLK HR  P   AA FH P F C+NPKV 
Subjt:  MFNAKWDSARRAWKIQTPR-----RCPLPVVLRPVRRFIKRLVHPISTPAPLP--PHYAERQFSFNDTPVFHLKLHRRRP---AAWFHLPWFWCMNPKV-

Query:  ---EFENCVVDVGEDGGWDRRRLCGGACSY------EGEEDEDGIDLKAEKFIKMFYEEMKLQNQ
           EFE+ VVD  +DGGW+R RL GG C Y      E EE+EDGIDLKAEKFIKMFYEEMK+Q+Q
Subjt:  ---EFENCVVDVGEDGGWDRRRLCGGACSY------EGEEDEDGIDLKAEKFIKMFYEEMKLQNQ

TrEMBL top hitse value%identityAlignment
A0A059A8V4 Uncharacterized protein1.2e-1344.44Show/hide
Query:  YAERQFSFNDTPVFHLKLHRRRPA--AWFHLPWFWCMNPKVEFENCVVDVGEDGGWDRRRLC----GGACSY-------EGEEDEDGIDLKAEKFIKMFY
        Y ER+ SF++TP+FH+K+HR R +  + F LP   C++P V+FE    D  +DG  +R+ L     GG C Y         EE E+GID +AE+FI  FY
Subjt:  YAERQFSFNDTPVFHLKLHRRRPA--AWFHLPWFWCMNPKVEFENCVVDVGEDGGWDRRRLC----GGACSY-------EGEEDEDGIDLKAEKFIKMFY

Query:  EEMKLQNQ
        E+MKLQ Q
Subjt:  EEMKLQNQ

A0A0A0KYA9 Uncharacterized protein3.8e-3660.42Show/hide
Query:  WDSARRAWKIQTPRRCPLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRR----PAAWFHLPWFWCMNPKVEFENCVVDVGED
        W    R WK+ + RR   PV  RP+RRFIKR++HP  TP PLPPHYAERQFSFNDTP+FHLK H RR     AA F +P F C+NPKVEFE       ED
Subjt:  WDSARRAWKIQTPRRCPLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRR----PAAWFHLPWFWCMNPKVEFENCVVDVGED

Query:  GGWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ
          W+RR         E EE+EDGIDLKAEKFIKMFYEEMK+Q+Q
Subjt:  GGWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ

A0A1S3BZI3 neuronal acetylcholine receptor subunit alpha-2-like2.6e-2953.15Show/hide
Query:  NAKWDSARRAWKIQTPRRCPLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVVDVGEDG
        + K+   R+ WKI    R   PV  RP+RRFIKR+VH  +TP PLP HYAERQFSFNDTP+FH +         F +P F C+NPKVEFE       +D 
Subjt:  NAKWDSARRAWKIQTPRRCPLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVVDVGEDG

Query:  GWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ
         W+           E EE+EDGIDLKAEKFIKMFYEEMK+Q+Q
Subjt:  GWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ

A0A5D3E0E5 Neuronal acetylcholine receptor subunit alpha-2-like2.6e-2953.15Show/hide
Query:  NAKWDSARRAWKIQTPRRCPLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVVDVGEDG
        + K+   R+ WKI    R   PV  RP+RRFIKR+VH  +TP PLP HYAERQFSFNDTP+FH +         F +P F C+NPKVEFE       +D 
Subjt:  NAKWDSARRAWKIQTPRRCPLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVVDVGEDG

Query:  GWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ
         W+           E EE+EDGIDLKAEKFIKMFYEEMK+Q+Q
Subjt:  GWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ

A0A6J1F231 uncharacterized protein LOC1114414551.8e-2248.99Show/hide
Query:  KWDSARRA------WKIQTPRRC--PLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVV
        KWD+ARRA      WKI T RR     PV  R V RFIKRL+HP  TP PL P+ AERQFSFND P+ HLKLHRR P            +P  ++E    
Subjt:  KWDSARRA------WKIQTPRRC--PLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVV

Query:  DVGEDGGWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ
                            E EE+E+GID KAEKFIKMFYEEM+LQ+Q
Subjt:  DVGEDGGWDRRRLCGGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02170.1 unknown protein2.3e-0936.73Show/hide
Query:  HYAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVVDVGEDGGWDRRRLCG--GACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ
        +Y ERQ SF++TP+F++K     P +        C  P V+F+      G+D   D  +  G   +CS    E+E G+D++AE+FI  FYE++KLQ Q
Subjt:  HYAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVVDVGEDGGWDRRRLCG--GACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQ

AT5G38700.1 unknown protein1.0e-0936.45Show/hide
Query:  YAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVVDVGEDGGWDRRRLCG---GACSY---------EGEEDEDGIDLKAEKFIKMFYE
        Y E+Q SF++TP+F++K+H R  +  F LP   C+    +F+      G     D  R  G   G+C+          + EE+E G+D++AE+FI  FYE
Subjt:  YAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVVDVGEDGGWDRRRLCG---GACSY---------EGEEDEDGIDLKAEKFIKMFYE

Query:  EMKLQNQ
        +MKLQ Q
Subjt:  EMKLQNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAATGCTAAATGGGATTCCGCTCGCAGAGCATGGAAAATTCAGACCCCCCGCCGCTGCCCCCTCCCGGTGGTTCTCCGCCCCGTGCGGCGGTTCATCAAGCGACT
CGTCCACCCAATTTCAACCCCAGCTCCTCTCCCCCCACATTATGCAGAGCGTCAATTCTCTTTCAACGACACCCCTGTTTTCCACCTGAAATTGCACCGCCGTCGGCCGG
CGGCGTGGTTCCACCTGCCATGGTTTTGGTGCATGAACCCGAAGGTTGAGTTTGAGAACTGTGTTGTTGATGTTGGTGAAGACGGTGGATGGGACCGGCGGCGATTGTGC
GGCGGCGCGTGTAGTTATGAAGGGGAAGAGGATGAAGATGGGATTGATTTGAAGGCTGAGAAATTTATAAAAATGTTCTATGAGGAAATGAAGTTGCAGAATCAGGAGTG
A
mRNA sequenceShow/hide mRNA sequence
ATGTTCAATGCTAAATGGGATTCCGCTCGCAGAGCATGGAAAATTCAGACCCCCCGCCGCTGCCCCCTCCCGGTGGTTCTCCGCCCCGTGCGGCGGTTCATCAAGCGACT
CGTCCACCCAATTTCAACCCCAGCTCCTCTCCCCCCACATTATGCAGAGCGTCAATTCTCTTTCAACGACACCCCTGTTTTCCACCTGAAATTGCACCGCCGTCGGCCGG
CGGCGTGGTTCCACCTGCCATGGTTTTGGTGCATGAACCCGAAGGTTGAGTTTGAGAACTGTGTTGTTGATGTTGGTGAAGACGGTGGATGGGACCGGCGGCGATTGTGC
GGCGGCGCGTGTAGTTATGAAGGGGAAGAGGATGAAGATGGGATTGATTTGAAGGCTGAGAAATTTATAAAAATGTTCTATGAGGAAATGAAGTTGCAGAATCAGGAGTG
ATGATTTATAAGTCCCATCGTCGGATTATTCACGGGTTTGAGTTTGACATCTTAATCAAAGTTTAGAACTCGATTTAAGTCTATTTATGAAGTTTGAGTTTAGAAAAATT
GTGAAAAACTTAATCAGTGGACTATTATTCGAG
Protein sequenceShow/hide protein sequence
MFNAKWDSARRAWKIQTPRRCPLPVVLRPVRRFIKRLVHPISTPAPLPPHYAERQFSFNDTPVFHLKLHRRRPAAWFHLPWFWCMNPKVEFENCVVDVGEDGGWDRRRLC
GGACSYEGEEDEDGIDLKAEKFIKMFYEEMKLQNQE