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Tan0022851 (gene) of Snake gourd v1 genome

Gene IDTan0022851
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG11:36523600..36524022
RNA-Seq ExpressionTan0022851
SyntenyTan0022851
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-4170.5Show/hide
Query:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MF Q S QI+H++LKY+YN+RM EG+SVREHV+++MVHFNVAEMNG VIDE SQVSFI+ESLP+SFL+FRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
        Q  GE N+   +R+F +GS+S TKS  SSS +KK +KKK
Subjt:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-4170.5Show/hide
Query:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MF Q S QI+H++LKY+YN+RM EG+SVREHV+++MVHFNVAEMNG VIDE SQVSFI+ESLP+SFL+FRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
        Q  GE N+   +R+F +GS+S TKS  SSS +KK +KKK
Subjt:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-4170.5Show/hide
Query:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MF Q S QI+H++LKY+YN+RM EG+SVREHV+++MVHFNVAEMNG VIDE SQVSFI+ESLP+SFL+FRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
        Q  GE N+   +R+F +GS+S TKS  SSS +KK +KKK
Subjt:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-4170.5Show/hide
Query:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MF Q S QI+H++LKY+YN+RM EG+SVREHV+++MVHFNVAEMNG VIDE SQVSFI+ESLP+SFL+FRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
        Q  GE N+   +R+F +GS+S TKS  SSS +KK +KKK
Subjt:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-4170.5Show/hide
Query:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MF Q S QI+H++LKY+YN+RM EG+SVREHV+++MVHFNVAEMNG VIDE SQVSFI+ESLP+SFL+FRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
        Q  GE N+   +R+F +GS+S TKS  SSS +KK +KKK
Subjt:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein5.7e-4270.5Show/hide
Query:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MF Q S QI+H++LKY+YN+RM EG+SVREHV+++MVHFNVAEMNG VIDE SQVSFI+ESLP+SFL+FRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
        Q  GE N+   +R+F +GS+S TKS  SSS +KK +KKK
Subjt:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
A0A5A7TU93 Gag/pol protein5.7e-4270.5Show/hide
Query:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MF Q S QI+H++LKY+YN+RM EG+SVREHV+++MVHFNVAEMNG VIDE SQVSFI+ESLP+SFL+FRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
        Q  GE N+   +R+F +GS+S TKS  SSS +KK +KKK
Subjt:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
A0A5A7TWB9 Gag/pol protein5.7e-4270.5Show/hide
Query:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MF Q S QI+H++LKY+YN+RM EG+SVREHV+++MVHFNVAEMNG VIDE SQVSFI+ESLP+SFL+FRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
        Q  GE N+   +R+F +GS+S TKS  SSS +KK +KKK
Subjt:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
A0A5A7V4M1 Gag/pol protein5.7e-4270.5Show/hide
Query:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MF Q S QI+H++LKY+YN+RM EG+SVREHV+++MVHFNVAEMNG VIDE SQVSFI+ESLP+SFL+FRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
        Q  GE N+   +R+F +GS+S TKS  SSS +KK +KKK
Subjt:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
A0A5D3CPJ6 Gag/pol protein5.7e-4270.5Show/hide
Query:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG
        MF Q S QI+H++LKY+YN+RM EG+SVREHV+++MVHFNVAEMNG VIDE SQVSFI+ESLP+SFL+FRSNAVMNKI Y LTTLLNELQTF+SLMK KG
Subjt:  MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKG

Query:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
        Q  GE N+   +R+F +GS+S TKS  SSS +KK +KKK
Subjt:  QADGEENLFAHSRRFQKGSSSRTKSCSSSSAHKKTQKKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAACAACCGTCTGGACAGATTCGACACGAATCCCTCAAATACGTTTATAACTCCCGTATGAAGGAGGGATCATCAGTGAGAGAACACGTTATTGATCTGATGGT
CCACTTCAACGTGGCTGAGATGAACGGAACGGTCATTGACGAGCAAAGTCAGGTATCGTTCATCATGGAATCTCTTCCGAAGAGTTTCCTGAAATTCCGCAGCAATGCGG
TGATGAACAAGATAGAGTATAACCTGACTACTCTCCTTAATGAACTACAGACTTTCCAGTCTCTTATGAAGAATAAGGGACAGGCTGATGGAGAGGAAAATCTGTTTGCC
CATTCCAGAAGGTTCCAGAAGGGTTCATCCTCTAGGACTAAGTCCTGTAGCTCATCTTCTGCGCATAAGAAGACCCAAAAGAAGAAAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAACAACCGTCTGGACAGATTCGACACGAATCCCTCAAATACGTTTATAACTCCCGTATGAAGGAGGGATCATCAGTGAGAGAACACGTTATTGATCTGATGGT
CCACTTCAACGTGGCTGAGATGAACGGAACGGTCATTGACGAGCAAAGTCAGGTATCGTTCATCATGGAATCTCTTCCGAAGAGTTTCCTGAAATTCCGCAGCAATGCGG
TGATGAACAAGATAGAGTATAACCTGACTACTCTCCTTAATGAACTACAGACTTTCCAGTCTCTTATGAAGAATAAGGGACAGGCTGATGGAGAGGAAAATCTGTTTGCC
CATTCCAGAAGGTTCCAGAAGGGTTCATCCTCTAGGACTAAGTCCTGTAGCTCATCTTCTGCGCATAAGAAGACCCAAAAGAAGAAAATATGA
Protein sequenceShow/hide protein sequence
MFEQPSGQIRHESLKYVYNSRMKEGSSVREHVIDLMVHFNVAEMNGTVIDEQSQVSFIMESLPKSFLKFRSNAVMNKIEYNLTTLLNELQTFQSLMKNKGQADGEENLFA
HSRRFQKGSSSRTKSCSSSSAHKKTQKKKI