CuGenDBv2

Gene ID	Tan0022856
Organism	Trichosanthes anguina (Snake gourd v1)
Description	psbQ-like protein 3, chloroplastic
Genome location	LG11:13414267..13415616
RNA-Seq Expression	Tan0022856
Synteny	Tan0022856
Gene Ontology terms	GO:0009767 - photosynthetic electron transport chain (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0009654 - photosystem II oxygen evolving complex (cellular component) GO:0019898 - extrinsic component of membrane (cellular component) GO:0005509 - calcium ion binding (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domains	IPR008797 - Oxygen-evolving enhancer protein 3 IPR023222 - PsbQ-like domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6601995.1 Auxin response factor 8, partial [Cucurbita argyrosperma subsp. sororia]

9.7e-76

86.02

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Query:  MAESSAISISNLSYRIHF-SSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMA-SSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQV
        MAE S IS+SNLS RIHF SSSPPI S Q F ITA R +NC +ISRRLGLGLIAL+A SSVA TPV IANALDLKLIAPEQSFEEAESGIRGHAEA+LQV
Subjt:  MAESSAISISNLSYRIHF-SSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMA-SSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQV

Query:  RGLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI
        RGLIESESWKEAQK+LR+SSPLLKQDLYTIIEYKPP ERPPLRKLYS+LFNNVTRMDYAARDKDAERV QCYDNI MAI+DILSRI
Subjt:  RGLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI

KAG7032694.1 PsbQ-like protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-76

87.1

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Query:  MAESSAISISNLSYRIHF-SSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMA-SSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQV
        MAE S IS+SNLS RIHF SSSPPI S Q F ITA R +NC +ISRRLGLGLIALMA SSVA TPV IANALDLKLIAPEQSFEEAESGIRGHAEA+LQV
Subjt:  MAESSAISISNLSYRIHF-SSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMA-SSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQV

Query:  RGLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI
        RGLIESESWKEAQK+LR+SSPLLKQDLYTIIEYKPPAERPPLRKLYS+LFNNVTRMDYAARDKDAERV QCYDNI MAI+DILSRI
Subjt:  RGLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI

XP_022962345.1 psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita moschata]

3.0e-77

87.63

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Query:  MAESSAISISNLSYRIHF-SSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMA-SSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQV
        MAE S IS+SNLS RIHF SSSPPI S Q F ITA R +NC +ISRRLGLGLIALMA SSVA TPV IANALDLKLIAPEQSFEEAESGIRGHAEA+LQV
Subjt:  MAESSAISISNLSYRIHF-SSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMA-SSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQV

Query:  RGLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI
        RGLIESESWKEAQK+LR+SSPLLKQDLYTIIEYKPPAERPPLRKLYS+LFNNVTRMDYAARDKDAERV QCYDNIVMAI+DILSRI
Subjt:  RGLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI

XP_022991100.1 psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita maxima]

3.4e-81

88.65

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Query:  MAESSAISISNLSYRIHFSSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMA-SSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQVR
        MAE S IS+SNLS RIHFSSSPPIISFQ F ITA R +NC +ISRRLGLG +ALMA SSVA TPV+I NALDLKLIAPEQSFEEAESGIRGHAEA+LQVR
Subjt:  MAESSAISISNLSYRIHFSSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMA-SSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQVR

Query:  GLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI
        GLIESESWKEAQK+LRSSSPLLKQDLYTIIEYKPPAERPPLRKLYS+LFNNVTRMDYAARDKDAERVWQCYDNIVMAI+DILSRI
Subjt:  GLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI

XP_023551782.1 psbQ-like protein 3, chloroplastic [Cucurbita pepo subsp. pepo]

3.6e-78

86.84

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Query:  MAESSAISISNLSYRIHF-SSSPPIISFQSFKITANRSNNC----TNISRRLGLGLIALMA-SSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEA
        MAE S IS+SNLS RIHF SSSPPIIS Q F ITA R +NC     +ISRRLGLGLIALMA SSVA TPV+IANALDLKLIAPEQSFEEAESGIRGHAEA
Subjt:  MAESSAISISNLSYRIHF-SSSPPIISFQSFKITANRSNNC----TNISRRLGLGLIALMA-SSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEA

Query:  LLQVRGLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI
        +LQVRGLIESESWKEAQK+LRSSSPLLKQDLYTIIEYKPPAERPPLR+LYS+LFNNVTRMDYAARDKDAERVWQCYDNIVMAI+DILSRI
Subjt:  LLQVRGLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KT23 Uncharacterized protein

8.0e-68

77.72

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Query:  MAESSAISISNLSYRIHFSSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMASSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQVRG
        MA+   IS+SNL+ RIHFS SP  ISF SF  T N SNN TNISRRLGLG IALMASSV   P E+ANALDLKLIAPEQS +EAESGIR HAEALLQVR 
Subjt:  MAESSAISISNLSYRIHFSSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMASSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQVRG

Query:  LIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI
        LIESE+WKEAQKRLRS+S LLKQDLYTIIEYKPPAERP LRKLYS+LFNNVTRMDYAARDKD   VW+ Y  + MAI+DILSRI
Subjt:  LIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI

A0A1S3CIJ1 psbQ-like protein 3, chloroplastic

3.0e-67

77.17

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Query:  MAESSAISISNLSYRIHFSSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMASSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQVRG
        MA+   IS+SNL+ RIHFSSSP  ISFQSF  T N S N  NISRRLGLG IALMASSV   P E+ANAL+LKLIAPEQS +EAE GIRGHAEALLQVR 
Subjt:  MAESSAISISNLSYRIHFSSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMASSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQVRG

Query:  LIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI
        L+ESE+WKEAQKRLRS+S LLKQDLYTIIEYKPPAERP LRKLYS+LFNNVTRMDYAARDKDA  V +CY  + MAI+DILSRI
Subjt:  LIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI

A0A5A7VLN5 PsbQ-like protein 3

3.0e-67

77.17

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Query:  MAESSAISISNLSYRIHFSSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMASSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQVRG
        MA+   IS+SNL+ RIHFSSSP  ISFQSF  T N S N  NISRRLGLG IALMASSV   P E+ANAL+LKLIAPEQS +EAE GIRGHAEALLQVR 
Subjt:  MAESSAISISNLSYRIHFSSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMASSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQVRG

Query:  LIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI
        L+ESE+WKEAQKRLRS+S LLKQDLYTIIEYKPPAERP LRKLYS+LFNNVTRMDYAARDKDA  V +CY  + MAI+DILSRI
Subjt:  LIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI

A0A6J1HES6 psbQ-like protein 3, chloroplastic isoform X1

1.5e-77

87.63

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Query:  MAESSAISISNLSYRIHF-SSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMA-SSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQV
        MAE S IS+SNLS RIHF SSSPPI S Q F ITA R +NC +ISRRLGLGLIALMA SSVA TPV IANALDLKLIAPEQSFEEAESGIRGHAEA+LQV
Subjt:  MAESSAISISNLSYRIHF-SSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMA-SSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQV

Query:  RGLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI
        RGLIESESWKEAQK+LR+SSPLLKQDLYTIIEYKPPAERPPLRKLYS+LFNNVTRMDYAARDKDAERV QCYDNIVMAI+DILSRI
Subjt:  RGLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI

A0A6J1JRX6 psbQ-like protein 3, chloroplastic isoform X1

1.7e-81

88.65

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Query:  MAESSAISISNLSYRIHFSSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMA-SSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQVR
        MAE S IS+SNLS RIHFSSSPPIISFQ F ITA R +NC +ISRRLGLG +ALMA SSVA TPV+I NALDLKLIAPEQSFEEAESGIRGHAEA+LQVR
Subjt:  MAESSAISISNLSYRIHFSSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMA-SSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQVR

Query:  GLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI
        GLIESESWKEAQK+LRSSSPLLKQDLYTIIEYKPPAERPPLRKLYS+LFNNVTRMDYAARDKDAERVWQCYDNIVMAI+DILSRI
Subjt:  GLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI

SwissProt top hits

e value

%identity

Alignment

Q2V4B2 PsbQ-like protein 3, chloroplastic

1.4e-21

48.62

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Query:  PEQSFEEAESGIRGHAEALLQVRG-LIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVM
        PE++ E A+ G+R +AE + +++  +IE + WKE  K LR S+  +KQD Y II+ KPP +RP  R LYS LFN++T+MDYAARD D  +V + Y NIV 
Subjt:  PEQSFEEAESGIRGHAEALLQVRG-LIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVM

Query:  AITDILSRI
         + DI  RI
Subjt:  AITDILSRI

Arabidopsis top hits

e value

%identity

Alignment

AT2G01918.1 PsbQ-like 3

1.0e-22

48.62

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Query:  PEQSFEEAESGIRGHAEALLQVRG-LIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVM
        PE++ E A+ G+R +AE + +++  +IE + WKE  K LR S+  +KQD Y II+ KPP +RP  R LYS LFN++T+MDYAARD D  +V + Y NIV 
Subjt:  PEQSFEEAESGIRGHAEALLQVRG-LIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVM

Query:  AITDILSRI
         + DI  RI
Subjt:  AITDILSRI

AT3G01440.1 PsbQ-like 1

4.7e-04

24.74

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Query:  IRGHAEALLQVRGLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI
        ++ +A  LL +  LI  ++    +K LR  S  L  D   +I      ++ PL  L + LF+N  +++ AA+ K+      CY +    + ++++R+
Subjt:  IRGHAEALLQVRGLIESESWKEAQKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGAATCAAGCGCAATCTCAATCTCAAACCTCAGTTATCGCATCCATTTCTCTTCCTCTCCTCCCATAATCTCCTTCCAATCGTTCAAGATCACGGCCAATCGTTC
TAACAATTGCACAAACATAAGCAGAAGATTAGGGCTGGGATTGATAGCTTTAATGGCGTCGTCAGTAGCTAGAACGCCGGTGGAAATAGCGAACGCTTTGGATCTGAAAT
TGATCGCGCCGGAGCAGAGCTTCGAGGAGGCTGAGAGCGGAATCAGAGGCCACGCGGAAGCGCTTTTGCAGGTGAGAGGTTTAATCGAATCGGAGTCTTGGAAGGAAGCT
CAGAAGCGGTTGAGAAGCAGTTCGCCGCTGCTGAAACAGGATCTCTACACTATAATCGAATACAAACCGCCTGCTGAAAGACCTCCTCTCAGGAAACTGTATTCTGTTCT
CTTCAACAATGTTACTCGAATGGATTATGCTGCGAGAGATAAAGATGCAGAACGAGTTTGGCAGTGCTACGATAACATTGTGATGGCCATTACTGACATTTTGTCCAGAA
TTTAG

mRNA sequence

Show/hide mRNA sequence

CTCGCATCCATAAATAGTCACAGAGTTCACAAAAAGCTTCACTCTGTACTCCAATGGCGGAATCAAGCGCAATCTCAATCTCAAACCTCAGTTATCGCATCCATTTCTCT
TCCTCTCCTCCCATAATCTCCTTCCAATCGTTCAAGATCACGGCCAATCGTTCTAACAATTGCACAAACATAAGCAGAAGATTAGGGCTGGGATTGATAGCTTTAATGGC
GTCGTCAGTAGCTAGAACGCCGGTGGAAATAGCGAACGCTTTGGATCTGAAATTGATCGCGCCGGAGCAGAGCTTCGAGGAGGCTGAGAGCGGAATCAGAGGCCACGCGG
AAGCGCTTTTGCAGGTGAGAGGTTTAATCGAATCGGAGTCTTGGAAGGAAGCTCAGAAGCGGTTGAGAAGCAGTTCGCCGCTGCTGAAACAGGATCTCTACACTATAATC
GAATACAAACCGCCTGCTGAAAGACCTCCTCTCAGGAAACTGTATTCTGTTCTCTTCAACAATGTTACTCGAATGGATTATGCTGCGAGAGATAAAGATGCAGAACGAGT
TTGGCAGTGCTACGATAACATTGTGATGGCCATTACTGACATTTTGTCCAGAATTTAGAAAGATAAGTAAAGACTATCGATTCTCAAGCCATTGAAATCGTAATCCATTT
TAGTGTTCTTGAGTTGAGTTGGATTTGATTGATTTTTTTCTCAACCAACTTAATTGTTTTAGACTGTTCAACTTAGACAATTCTAGTTCGCAATCAATCTAAGTATGAAA
TGCTTAGACTGAATGGATTGGAGTTGTTCTAAATTTTGTTCATGAAAAAGAAAACAAAATGTTAGTCCCTAGACATCAATTTATTAATTAAGTTGCAAAACTATGCAAGC
ATTTCACTTTAATATGGCCAAATCTGATTCATAATGATAAATTAGTTGTGATGAAAACACATCCTAATGATAAATTGGGTACAAAATGGCCACATCCTTAAACTAAAAAG
GAAGGTTAAAAAGAAGGGATGTAATAAAGACAGGGTGCATGGAAATATATAGGAGTGTTTTGGGGTTGTGGAACTAAACCATCTTTGTTTTGGAGAGCATAGTTACTTGT
TTAGGGTGCATAGTTAATAGGGGGATTCGTACGGATGACTCATTTTTTACCGTTTTAATGTCATCTGACCCGGTGCTCCAAAATAATGAAAATTGACTTATTCTAAC

Protein sequence

Show/hide protein sequence

MAESSAISISNLSYRIHFSSSPPIISFQSFKITANRSNNCTNISRRLGLGLIALMASSVARTPVEIANALDLKLIAPEQSFEEAESGIRGHAEALLQVRGLIESESWKEA
QKRLRSSSPLLKQDLYTIIEYKPPAERPPLRKLYSVLFNNVTRMDYAARDKDAERVWQCYDNIVMAITDILSRI

Tan0022856 (gene) of Snake gourd v1 genome